Dear acedb users,
I am building an EST database using ACEDB. I have many short sequences and by using MSPcrunch, I have been able to get the different homologies in my database. Now I would like to be able to see the blast alignments for example by using blixem.
How can I do that? Is there a build in function?
I could save the blast result files in a folder and creat a pick_me_to_call class with a short script using blixem and MSPcrunch to crucnh on the fly. But Blixem requires a sequence file. Do I need to dump the sequences before blixeming them or can blixem use the ACEDB sequence?
Thank you for reading my message.
Station Biologique de Roscoff, FRANCE
crepinau at sb-roscoff.fr