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[Arthropod] Updated Gene-omes from mRNA-assembly with EvidentialGene

Don Gilbert via arthropod%40net.bio.net (by gilbertd from net.bio.net)
Mon Jun 10 16:02:47 EST 2013


Updated Gene-omes from mRNA-assembly with EvidentialGene are 
now at http://arthropods.eugenes.org/EvidentialGene/
arthropods/locust/locust1eg6/publicset/
arthropods/pogonusbeetle/pogonus1eg6/publicset/
arthropods/whitefly/whitefly1eg6/publicset/
arthropods/whiteshrimp/litova1eg6/publicset/
arthropods/tigershrimp/shrimpt1eg6/publicset/
arthropods/zebratick/ztick4eg6/publicset/
plants/banana/banana1eg6/publicset/
vertebrates/catfish/catfish1eg6/publicset/

Each species publicset/ includes annotated mRNA assemblies 
with protein and CDS translations.

aa_pub.fa.gz    : protein
cds_pub.fa.gz   : coding sequence
mrna_pub.fa.gz  : mRNA sequence
ann.txt 	: table of annotations with sizes, homology Names/IDs

For some above, this is version 2, a better mRNA-assembly
than version 1 of last year. For others, this is the first Evigene
assembly.  These will I hope be the final publication versions.

-- Don Gilbert
10 June 2013, gilbertd near indiana edu



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