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Hydrophobic Cluster Analysis

Yves Bertheau bertheau at inapv.inapg.inra.fr
Sun Sep 20 10:23:44 EST 1992


In article <14550 at gazette.bcm.tmc.edu> pburch at bcm.tmc.edu (Paula Burch) writes:
>
>
>Can anyone point me to a program for performing hydrophobic cluster 
>analysis of protein sequences? I've read mentions of HCA plot, written 
>in Fortran 77, and also HCABAND in BASIC.
>
>The reference is C. Gaboriaud, V. Bissery, T. Benchetrit and J.P. Mornon's 
>Hydrophobic cluster analysis: an efficient new way to compare and analyse 
>amino acid sequences, FEBS Letters 224(1):149-155 (1987).
>
>I have Dr. Mornon's address, but don't really want to wait as long as it 
>would take for mail to reach him, and I'm afraid to try directory assistance 
>in France to try to get his phone number. Could somebody possibly have an 
>e-mail address for him?


His e-mail address is: MORNON at FRLMCP61.BITNET

>
>All 23 of the papers I found in Medline that mentioned HCA were from 
>various European labs--no sign that anyone has ever used it on this 
>continent.

We are using it to compare several homologous genes. A paper is in preparation...


>
>Any help would be greatly appreciated.
>
>_________________________________________________________________________
>Paula E. Burch, Ph.D.             Molecular Biology Computational Resource
>Baylor College of Medicine        internet: pburch at bcm.tmc.edu
>Houston, Texas 77030              phone: (713)798-6023


-- 
		Yves Bertheau
INRA INA P-G		Pathologie Vegetale	16 rue Claude Bernard	
75231 PARIS cedex 05	FRANCE	Tel +33 (1) 43.31.93.97 
Fax: +33 (1) 43.31.83.82 Internet: bertheau at inapg.inra.fr




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