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Software to find promoter/repressor binding sites in sequences?

W. Grady Campbell grady at elm.circa.ufl.edu
Sat Jan 22 16:10:48 EST 1994



      I would like to know of programs on a DOS or VMS platform that
will find potential sites of interest in the promoter regions in DNA
sequences. In particular, I am interested in finding potential hormone
response elements, but any information on possible transcription factor
binding sites would also be useful.
      We already have an array of programs such as ATLAS and BLAST; is
there something among these programs that will do what I'd like?

                                            Many Thanks,
                                            Grady Campbell


e-mail: grady at icbr.ifas.ufl.edu
Department of Biochemistry and Molecular Biology
University of Florida




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