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TFDsearch

Andre Choo engcbh at leonis.nus.sg
Thu Apr 6 01:26:30 EST 1995


I was wondering whether anyone has used TFDsearch by Lee Frank Kolakowski?
I am having alot of difficulty with it.  According to the instructions, 
no particular format is required because it automatically uses ReadSeq to 
convert to the appropriate format.  When I execute the software, the 
results I get seem rather strange...I am able to get transcription factor 
sites beyond the length of the nucleotide sequence I submit for analysis 
(eg the sequence is only 688 but I get transcription sites at position 
700).  The sites listed within the actual sequence also do not correspond 
with the actual sequence.  Not sure why this happens?  Does anyone know 
the E-mail of the author so that I could contact him as well?  Thanks!  




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