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Structural protein similarity program

Geoff Barton gjb at bioch.ox.ac.uk
Thu Jan 5 06:56:08 EST 1995


In article <D1vt6z.CvJ at wst.edvz.sbg.ac.at>, floeckn at wst.edvz.sbg.ac.at (Floeckner Hannes) writes:
|> 
|> Hi!
|> 
|> I'm looking for public domain programs for structure-structure alignments and
|> for the identification of structural similarities in protein folds. The
|> program should run on either SGI or Dec-Alpha (in the worst case on
|> MS-DOS PC's).
|> 
|> Anyone who knows a program to do structure-strucutre alignment?
|> 
|> Thanx
|> 	Hannes

You could try STAMP (Russell and Barton, 1992, Proteins, 14, 309-323). 
Details of availability are available by anonymous ftp or WWW from
the following addresses.

Geoff.  Barton

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Geoffrey J. Barton
Laboratory of Molecular Biophysics, University of Oxford
Rex Richards Building, South Parks Road, Oxford OX1 3QU, U.K.

email:  gjb at bioch.ox.ac.uk    Telephone: +44 1865 275368  Fax: +44 1865 510454 
anonymous-ftp: geoff.biop.ox.ac.uk             WWW: http://geoff.biop.ox.ac.uk
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-- 
Geoff Barton




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