We are looking for a program to tell us if two sequences are likely to be
similar by chance or by homology. I assume there would be a method by
randomly shuffling the bases (ie, keeping the base ratio the same but
randomizing their order, then comparing the percent remaining the same
Any suggestions on this will be greatly appreciated!
Dave Carmean carmean at sfu.ca
Mary Berbee berbee at unixg.ubc.ca