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Promoter Search: HELP!

Kenta Nakai nakai at imcb.osaka-u.ac.jp
Mon Oct 23 21:40:47 EST 1995


In article <465uac$qik at dartvax.dartmouth.edu>, 
Mari.L.Shinohara at dartmouth.edu (Mari L. Shinohara) wrote:

> I'd like to know any information that makes me available to know what
> cis-acting elements a promoter region sequence has.  I tried the BLAST
> search but, as you know, this is rather for searching similar genes and
> not good for finding "protein binding site sequence", which usually
> consist of a short strech of sequence.

Try the TFSEARCH server that is intended for locating known
binding motifs of transcription factors.

The URL is http://www.genome.ad.jp/SIT/TFSEARCH.html

Kenta Nakai
Osaka University, Japan




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