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Help: Detection of hairpins/T7 termination signals

Maido Remm maido at evolution.bmc.uu.se
Tue May 5 04:05:17 EST 1998


U. Gausmann wrote:
> 
> Hallo,
> 
> does anybody know how to detect secondary structures in RNA?
> I 'd like to know if my specific sequence (mammalian) contains
> termination signals for T7 polymerase.
> I think hairpin structures result in termination of transcription
> - am I right?
> 
Have you tried mfold?
http://www.ibc.wustl.edu/~zuker/rna/form1.cgi

Maido Remm,
ESTONIAN BIOCENTER




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