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INCA - Java based BLAST client

Richard C. Graul graul at netcom.com
Thu May 7 21:56:37 EST 1998


http://itsa.ucsf.edu/~gram/home/inca/

Iterative
Neighborhood
Cluster
Analysis

INCA is a Java applet that runs BLAST.

INCA is useful for elucidating distant relationships.

Give INCA a starter sequence and it finds related sequences. INCA runs
BLAST on the starter sequence and then runs BLAST on the matching
sequences. INCA keeps track of all the results.

INCA is useful for finding ESTs.

You can take the result of the first pass of INCA and use it
to probe the EST database and suck out all the related ESTs.

http://itsa.ucsf.edu/~gram/home/inca/

Richard C. Graul (graul at netcom.com)
Dept. of Pharm. Chem. & School of Pharmacy
UCSF




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