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looking for blast2.0 output graphic browser.

Tim Cutts timc at chiark.greenend.org.uk
Thu Sep 21 08:10:52 EST 2000


In article <39C8A7AD.107FBB98 at cephb.fr>,
Emmanuel Tubacher  <Emmanuel.Tubacher at cephb.fr> wrote:
>Hello,
>
>I'am looking for a software that can parse blast2.0 output files
>graphically, in the same manner (but improved) 
>as blixem/MSPcrunch did for blast1.4, Unix or cross platform (Java ?).

Recent versions of MSPcrunch do support BLAST 2.0.  blixem can't do
gapped alignments, though, which is a shame.  Or has this changed in
more recent versions?

Tim.







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