IUBio GIL .. BIOSCI/Bionet News .. Biosequences .. Software .. FTP

Release of BioSVG 0.01

Malay Kumar Basu curiouser at gene.ccmbindia.org
Fri Apr 4 04:44:20 EST 2003

Dear fellow Biosoftware hackers:

I release the first preview release of BioSVG. Dowload it from:

To run it your need Pastel. Dowload it from:

For the uninitiated:
BioSVG is a Perl framework for generating Scalable Vector Graphics (SVG) 
images. For a demo see: http://www.bioinformatics.org/savvy

This release just contains one module Chromatogram.pm. It does a pretty
intelligent job! Yep, it draws chromatogram. I am sorry, no doc yet.

Here it all takes to draw a chromatogram from an ABI chromatogram file.

use BioSVG;
my $trace = BioSVG::Chromatogram->create_from_file(
				-file=>'TEST.ab1', # file name
				-type=>"ABI",      # only ABI supported
						   # no SCF yet
				-height=>200,      # height in pixels
				-hscale=>2);       # Just a number
						   # increase it to flare
						   # up the picks


Hope you guys like it.

Malay Kumar Basu
Centre for Cellular and Molecular Biology
Hyderabad 500007

Fax: +91-40-7160591 or +91-40-7160311
Phone: +91-40-7160222
curiouser at gene.ccmbindia.org


More information about the Bio-soft mailing list

Send comments to us at archive@iubioarchive.bio.net