<http://jaligner.sourceforge.net> is an open source Java implementation
of Smith-Waterman algorithm for biological sequence alignment.
The new release includes several major user interface (GUI) enhancements:
* Executing as a desktop application as well as a JNLP-based.
* Editing capabilities for the input sequences.
* Interaction with the system clipboard (copy, cut and paste).
* Detailed logging for actions and errors.
In addition, the new release supports input sequences in plain text (no
format) besides the FASTA format.
Your comments, questions and suggestions are welcome!
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