Sorry I have forgot to specify that I am currently trying to use
geneWise for the annotation of mitochondrial genes, which do not have
introns following the GT/AG rule (it is much more complicated in this
case, there are two types of introns, group I and group II and
complicated splice rules). So I will use geneWise without the GT/AG
rules. Thank you all, for the precision.
I try to use geneWise on a small portion of the genome, in order to
test the prediction of geneWise.
Thanks for your help