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[Bio-software] Re: Bio-soft Digest, Vol 38, Issue 8

Amit Dattatreya Parhar via bio-soft%40net.bio.net (by amit.p from ocimumbio.com)
Mon Jul 21 23:38:18 EST 2008


Dear Jyothish

Hi all,
>
> Can you please suggest some comercial softwares that can help me
>
> Molecular modelling
> Datamining
> Support Vector Machine
> Neural Networks.
>

FOr SVM you can use libSVM, winSVM http://www.csie.ntu.edu.tw/~cjlin/libsvm/
for free.

For molecular modelling :

you opt for expensive http://accelrys.com/products/discovery-studio/

or you can go for cheaper and effective : http://www.yasara.org/

For datamining there is nothing better than R-package which is absolutely
free and very good.

but you have to install and learn its commands to use.

If your lab is doing microarrays experiments then you should opt for
http://www.ocimumbio.com/web/bioinformatics/prod_details.asp?prod_id=20&prodType=1


regards,
Amit

----- Original Message ----- 
From: <bio-soft-request from oat.bio.indiana.edu>
To: <bio-soft from magpie.bio.indiana.edu>
Sent: Monday, July 21, 2008 10:33 PM
Subject: Bio-soft Digest, Vol 38, Issue 8


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> Today's Topics:
>
>    1. Software needed... (Jyothish NT)
>    2. Bioinformatics Survey (Mike Barton)
>    3. Re: Software needed... (Stephen Wolstenholme)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Mon, 21 Jul 2008 15:06:15 +0530
> From: "Jyothish NT" <joyjoy.nt from gmail.com>
> Subject: [Bio-software] Software needed...
> To: bio-soft from magpie.bio.indiana.edu
> Message-ID:
> <fd2c97e50807210236u574d5fb3ud8f4e06c559b9ada from mail.gmail.com>
> Content-Type: text/plain; charset=ISO-8859-1
>
> Hi all,
>
> Can you please suggest some comercial softwares that can help me
>
> Molecular modelling
> Datamining
> Support Vector Machine
> Neural Networks.
>
>
> -- 
> Regards...
> Jyothish N.T.
> Research Assistant
> 116, Dept. of Mathematics,
> Indian Institute of Technology Bombay,
> Powai, Mumbai-400076.
>
> Email : jyothish from iitb.ac.in
> Ph : +91-9920980148
>
>
> ------------------------------
>
> Message: 2
> Date: Mon, 21 Jul 2008 04:06:17 -0700 (PDT)
> From: Mike Barton <barton.michael from gmail.com>
> Subject: [Bio-software] Bioinformatics Survey
> To: bionet-software from moderators.isc.org
> Message-ID:
> <d55c35e1-71c6-4976-a8f1-0360ba68857d from 8g2000hse.googlegroups.com>
> Content-Type: text/plain; charset=ISO-8859-1
>
> Hi,
>
> I'm trying to get some data on pursuing a career in bioinformatics,
> and if you have a spare five minutes could you take the time to answer
> some the questions? You can leave any fields blank that you don't wish
> to answer.
>
> The link is here.
>
>
http://www.bioinformaticszen.com/2008/07/creating-a-picture-of-different-careers-in-bioinformatics/
>
> Thanks
>
> Michael Barton
>
>
>
> ------------------------------
>
> Message: 3
> Date: Mon, 21 Jul 2008 13:01:29 +0100
> From: Stephen Wolstenholme <steve from tropheus.demon.co.uk>
> Subject: [Bio-software] Re: Software needed...
> To: bionet-software from moderators.isc.org
> Message-ID: <viu8841pn783183f31istcqcphorqpfe40 from 4ax.com>
> Content-Type: text/plain; charset=us-ascii
>
> On Mon, 21 Jul 2008 15:06:15 +0530, "Jyothish NT"
> <joyjoy.nt from gmail.com> wrote:
>
> >Hi all,
> >
> >Can you please suggest some comercial softwares that can help me
> >
> >Molecular modelling
> >Datamining
> >Support Vector Machine
> >Neural Networks.
>
> You can try my EasyNN-plus and SwingNN for free.
>
> Steve
>
> -- 
> EasyNN-plus. Build Neural Networks.  http://www.easynn.com
> SwingNN.     Forecast the Future.    http://www.swingnn.com
> Neural Planner Software Ltd          http://www.NPSL1.com
>
>
>
> ------------------------------
>
> _______________________________________________
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> End of Bio-soft Digest, Vol 38, Issue 8
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