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[Bio-software] In tandem compliment repeats

James F. Lynn via bio-soft%40net.bio.net (by jlynn from acsalaska.net)
Wed Dec 8 22:15:34 EST 2010


Tandem compliment repeats are an example of a (multiple) context-
sensitive language (much like rna pseudoknots in structure.)  An
example is ATGC-TACG where A in the first set is bound to T in the
second set...
I've released a small app that explores the language of them in raw
dna data that can be found here:  http://www.rnaparse.com/Downloads.html



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