I have updated the Icarus parser (cutg.is) for the CUTG codon usage
database so that the 'Organism' index includes species names in
the same format as the other databases. This allows CUTG to be linked
to TAXONOMY (or any database with an Organism index) so you can
go directly from any sequence to the codon usage table.
CUTG seems to be currently only updated on the ftp.dna.affrc.go.jp
server and not on the mirrors.
Most other SRSWWW servers (except DKFZ) have an older release (104)
than the one I picked up yesterday (108).
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Peter Rice | Informatics Division, The Sanger Centre,
E-mail: pmr at sanger.ac.uk | Wellcome Trust Genome Campus,
Tel: (44) 1223 494967 | Hinxton, Cambridge, CB10 1SA, England
Fax: (44) 1223 494919 | URL: http://www.sanger.ac.uk/Users/pmr/