IUBio GIL .. BIOSCI/Bionet News .. Biosequences .. Software .. FTP


francis at cmmt.ubc.ca francis at cmmt.ubc.ca
Mon Jul 17 06:36:35 EST 2000

> To: bionet-software-www at net.bio.net
> From: "Simon" <dtoycr at tin.it>

> I am a biochemical researcher and i have a problem. I would like to know
> where i can find protein database in .fasta format. If you can halp me plese
> write to:
> dtoycr at tin.it
> Thank you very much for your help.

NCBI makes all of their blastable databases (including all of their
protein databases, such as nr.Z) available in FASTA format. 
See the README for details.


GenPept (all of the CDS present in GenBank) is also available 
in FASTA format:






| B.F. Francis Ouellette                      Tel: (604) 875-3815 | 
| Director, Bioinformatics Core Facility      Fax: (425) 740-6978 | 
| CMMT, UBC, Canada                        http://www.cmmt.ubc.ca | 
| francis at cmmt.ubc.ca                http://www.bioinformatics.ca |

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