==== RAT draft genome annotations fgenesh++
We're pleased to announce the release of fgenesh++ gene annotation on
the Nov. 2002 rat assembly produced by the Baylor College of Medicine
Rat Genome Sequencing Center and the Rat Genome Sequencing Consortium.
You can see/get gene annoation at UCSC Genome Browser on Rat Nov. 2002 Freeze
http://genome.ucsc.edu/cgi-bin/hgGateway?org=Rat
or alternatively in GenomeExplorer:
http://www.softberry.com/berry.phtml?topic=ratexp
Fgenesh++ annotated:
43008 genes includes 28955 genes supported by NR proteins, among them 3763
genes correponding RAT refseq mRNA
ID and Name of similar protein added after ## in name line of fasta files
*.pro
Refseq corresponding proteins additionally marked NM_..
Fgenesh++ predictions are based on complex fully automatic script that mapped
known Refseq RNA, predict genes and refine predicted genes that have protein
support from other organisms.
Reference:
Solovyev V.V. (2001) Statistical approaches in Eukaryotic gene prediction.
In Handbook of Statistical genetics (eds. Balding D. et al.),
John Wiley & Sons, Ltd., p. 83-127.)
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