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CDS sequences needed

Huaichun Wang hcwang at science.uottawa.ca
Fri May 10 10:44:00 EST 2002

I have a list of 5126 protein sequences with SwissProt ID or accession
number that I want to get the corresponding coding sequences from
Genbank, EMBL or other databases.
Although I can search NCBI web and got its gi number then from the gi
number link to get its corresponding mRNA sequence file, and then get
the CDS sequence, it is not a pracitical way to handle thousands of the
sequences I want. Is there a way to do this extraction of gene (CDS)
sequence according to swissprot IDs automatically?
Huaichun Wang


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