SSR update
Mary Polacco
maryp at teosinte.agron.missouri.edu
Thu Jan 11 13:05:27 EST 2001
The Missouri Maize Project has kindly provided 53 new SSR primers
and map locations to MaizeDB. In addition, they have supplied more
precise bin locations for some 193 previously mapped SSR. In 3 instances,
SSRs are now located differently than the original assignments:
umc1256, previously 1.00-1.01 now 2.09
umc1483, previously 1.01 now 8.01
umc1817, previously 2.00-2.02 now bin 8.0
Data, with details are accessible at the SSR page:
http://www.agron.missouri.edu/ssr.html
Noteworthy Comment: of the 816 public SSR mined from sequences in GenBank, 590
are from cDNAs, and of these, 532 were generated by the Stanford EST
project.
TWO SUMMARY TABLES WITH THE NEW DATA FOLLOW.
Cheers,
mary
Mary Polacco, PhD
USDA-ARS Plant Genetics Research Unit
Geneticist & Curator, Maize Genome Database - MaizeDB
Adjunct Assoc Prof, Dept Agronomy
University of Missouri, Columbia, MO 65211
+1 573 884 7873 (phone)
+1 573 884 7850 (fax)
http://www.agron.missouri.edu/ars_columbia/polacco.html
FILE 1: New, mapped SSR primers.
SSR Bins GenBank PrimerF PrimerR
---------- -------------------- -------------------- ------------------------------ ------------------------------
umc2025 1.05 CGCCGTAGTATTTGGTAGCAGAAG TCTACCGCTCCTTCGTCCAGTA
umc2029 1.08 AGAGCAATCCTGTTCCAAATGAAG CTTAAACCCAATCGAACTCGAACA
umc2028 1.09 ACGAGTCACGAATCCGGATAGA GATTGTCGTCATGCTTCCTTCTCT
umc2047 1.09 GACAGACATTCCTCGCTACCTGAT CTGCTAGCTACCAAACATTCCGAT
umc2045 1.11 AGAACACAGCACCACCTCCTTG GTACCGGAAGAAGAGACGGGAG
umc2030 2.04 CTTCAGCAACCGGAGACGAG GATGCAGTGTGCCAATAAAGATGA
umc2032 2.04 TCTATCATTCGAGTCAAGAAGCCA AAAAGAAGACGGATTTCTTCGGAC
umc2023 2.06 TCAGTCCCATTATATTCACCGACC TCCTCTTCTTTTCCTCTCAGAGCC
umc2019 2.07 GACATGGACTGCCTTCAAATGAT ATAGCTTTTCTCAGTAAGCGCCAG
umc2049 3.01 CCAGGTAGTTACTTTGCTGCTGCT GAGAGATGTAGAGAAACCGACCGA
umc2024 3.04 CTTTGGAGGCGCAAGAAACAG AAGAAGCCAGAAAGTCTGGTCCC
umc2033 3.04 TCTAGATCCCTAGAGTAGCTGCGG CACTCACGCAAATTAGCACAACTT
umc2020 3.05 TTTGGAGTTATGGTTTGCGTTTTT TGATAACGCTGAGAACGATGAAGA
umc2050 3.07 CTCCTGCTGTGATTCTAGGACGA CTGGATCTCGGCATGGTCTT
umc2048 3.10 GCTGAAGTCCCAACCACCAC TTGACATGTTCTACCATCTCACCAA
umc2039 4.03 CATCTCCTACCAGCTCACCCC GCTCGGGGTAGTAGTGTTCTCCTT
umc2054 4.05 CATTTCCTTCCCTGCTCTGATG TACAGATACTGGAGCACTCTCGGC
umc2061 4.05 GTCTGGAGAACTCCCTACCCATTC TAGCTTGAGAGACCGGAACAGC
umc2027 4.06 CAAATATCTTCGCAGCTCCAAATC GTACCTGTCTTTGGGGCTTTTCTT
umc2038 4.06- 4.07 ACAGAAACCAATGCATGTGATGAG TGCATGGTTGCTTCAGCAGT
umc2070 4.06 ACCTCTACGATCTCTCCGACGACT TCACACGCTCCTTCTCATATACCA
umc2041 4.08 CTACACAAGCATAGAGGCCTGGAG CAGTACGAGACGATGGAGGACAT
umc2046 4.09 CGTTCACCTCTGCCTTTTGTTC GAAGGATCCGACGAAGACCTG
umc2044 4.10 ACCTCTCTCCGCCGAAGAATC CATATAGGTCATGCCTGCCATCTC
umc2022 5.00 TTAGTCTAACCGAGTCCAACCAGTG ACCAGCAGACGGAGAGCTTG
umc2036 5.01 TCAATCAAGCCTCTCGTAAGGAAC CTCTTGATCTCAACCGAAATCCTG
umc2035 5.03 ACCACAACTACTACGGCCGAAAC ACTGTTGCTGGTACGAAGAGTTCC
umc2060 5.03 CCAATAATACCATTCTCCCCAGC GGGTTCCAGCAGTGAGTGACA
umc2063 5.03 AF099426 GGACTGAAGCGTGGAATGTTCT ATCGCAATCTGAGACCACTTGTT
umc2066 5.04 ACATGGGCCGATGACTAAGAATAG CTGAGTACACACATGTCACACAGTTG
umc2026 5.05 TTCGACATAGCAGACGAAACTCTG ACTGCACCCTAGTGTGATGTTCCT
umc2058 5.06 ACGACGAGACTCTGTTCTGGTTCT AGGAGGATTACGTCAATCTGTTCG
umc2068 6.00 CCGCTCCTTCTCCTCCTCATC GGAACTCCTCGAGCGTGAGC
umc2056 6.01 GCATTAGCAAACAAAGTGGGTTTC GGCGAAACTGTGATGAGAAAACAT
umc2040 6.05 GAGACACAGGAACAGAACCCTCTC GAGACATCTCGACACCTCTTGTGA
umc2055 6.05 CTTGGCTGCTTGCCCTATTAGAT CTCTGGTCTGGTGGTCCTGTG
umc2065 6.05 AW289047 CAAGGTTCGGTCCTTCTTCTCC GACACCTCGTCGTCGGTCAC
umc2059 6.08 GGAAAAGGAGGAACAGTGTAAGCA AGCGTGATCAGACGTACAATGCTA
umc2057 7.02 CCATCCGTAACACTTAAGGACGAC TCATGAAGCTCCAGCAGTATCTGT
umc2062 7.04 AI855336 CATGATCATCCTTAGCGACTCCTC CATCGAGCTCAAGGAGCAGGT
umc2042 8.01 GCAGTCTCTCCACTACCAGAGCAT AACAGAGGAGTACGAGGAGGAGC
umc2031 8.06 TGAGGATCCAGGGGTTCGAC ACAAGGTTCTTCCTCCTCCCTCTT
umc2037 8.06 TTCGCATTACTACGTTTGGTTCCT CCCACAGGACTGGTGTATCTGA
umc2052 8.08 GTACCCAACAAGCCCTACACCTCT CTTCCTCACGCCCCTGTAGTG
umc2018 10.01 TAGCCAAGCTTCTCCCTAGCTTTT GCAGTTGGAGGAGGAGCAGAC
umc2053 10.01 ATCTCTCCCTCGCTCTCCTTCTC AGCAGCAGGTTGGTCGAATG
umc2034 10.02 TATCTCCTCCGATCCTAACACCCT GCTCATACGGAGGGTCAGCTAAG
umc2069 10.02 ACAACCTCCTCCACGACCAAAC GTAGAGGTCCCACTTGTTCCCAAT
umc2016 10.03 AGAGACGACATGTCTATCCTTGCC ATTGCATTGCATTCAGCTGTTGT
umc2017 10.03 AGAGGTTACTACGGAGTGTGGCAG GTCAGGGTACTGCTTCTCGAACTC
umc2067 10.03 ACGATAAGTCTGGAAAGATCGTCG GATCTCTCGCACCACCTGTATGTA
umc2043 10.05 GAGGCATACGGCATACCATACC GTAGGAGAAACAGGTGCTGGTGTC
umc2021 10.07 AAACTCAAGCTCGGAATGTACTGC CGATACTGATCTACTTCACGCTGG
////
FILE 2. Bin refinements of previously mapped SSRs.
SSR Bins GenBank PrimerF PrimerR
---------- -------------------- -------------------- ------------------------------ ------------------------------
umc1160 1.01 AI586523 CGTTTGATATGATGTGGAGATTCG AAGCTTGTGAATGTTCTGGATGTC
umc1177 1.01 AI001344 CGTGTACCGCTCCTCTATAGTCGT AAGTGGCCGAATTCATCCTTTATT
umc1297 1.05 AI947917 TGGTCACTGACTGTTTCGACTAGC ATCGCCTCAACACACCTTCATATT
umc1676 1.05 AGTCGTACGATGACGGAGGC GCACCACCGACTGATCAAGA
umc1122 1.06 AI691437 CACAACTCCATCAGAGGACAGAGA CTGCTACGACATACGCAAGGC
umc1668 1.06 AGCAAATAAAAGTAGAGCGGCGAG ACCACCACCACTGCCTCCTC
umc1812 1.06 AW520058 TACAAGGAAGGCAAGTTCATCCTC ATGCAGGTGACATTCATCATCATC
umc1972 1.06 BE051243 ATAGCTCGAGTATTGCGTTGCTCT AGTTGTTGGTGATGGTGAAGGTG
umc1358 1.07 AI855272 AGAACCTCCCGCTTGACGAC ACCTCAACCTCGACCTCTGCAT
umc1374 1.07 AI881349 CTACTCCAGCAGTTCCGCTCC TTCAGATGGTGTAGTGTGGAGAGC
umc1661 1.07 ACGAGACTCCCTCCTCTCCTCTC GGAGTAAACTGTTGAAAGGCCCAT
umc1245 1.08 AW011644 TGGTTATGTGCATGATTTTTCCTG CATGCGTCTGATCTTCAGAATGTT
umc1184 1.09 U13702 CTTCCTTACGTGTCACCGCTCT GTGGAGTGATGTGATCGATGATG
umc1914 1.09 CAACATGAGCGTGCTAAATACTCG ACAGGAACACATGAGGTCATCAAA
umc1431 1.10 AI738206 GTTGCTGTCCCCGACGTAGTAG GTGAGAGTACCGAGATGGCTGAG
umc1331 1.11 AI881368 TTATGAACGTGGTCGTGACTATGG ATATCTGTCCCTCTCCCACCATC
umc1630 1.11 CAGACCTTCGAGGGCAAGAACT AGTTTTGGCTTCTTCTCCCAAGTC
umc1165 2.01 AI491254 TATCTTCAGACCCAAACATCGTCC GTCGATTGATTTCCCGATGTTAAA
umc1227 2.01 G54896 CAAGTTGGTGAGATGGATCTGTTG GCTCCTGGGTCTTCCTCTCC
umc1518 2.02 AQ844799 TAGCTCCTTTGCGCTATTCAGTCT GGCAGTGTTTTCTTTTGAAGTGCT
umc1552 2.02 AW067031 CTCGATAGCTCTGCTGCTTCCTC CAACACCAGCCCTACCCAGA
umc1185 2.03- 2.04 U13701 AGTAAAAGAGGCAAGGACTACGGC GCGGCGATATATACGAGGTTGT
umc1555 2.03 AW066809 ATAAAACGAACGACTCTCTCACCG ATATGTCTGACGAGCTTCGACACC
umc1026 2.04 G42324 TCGTCGTCTCCAATCATACGTG GCTACACGATACCATGGCGTTT
umc1485 2.04 AI734331 CAATACCATTACATACCCGCACAA CCGGCCGTTTAATTTACTAGTGTG
umc1579 2.04 AW057010 AAGATCAGCTAGCGAGAGAAGCAA AGGAGGTCAGTGCTGCAGGT
umc1635 2.05 GCTGAGCAGATCTTTCCTTGTTTC AAGGAGCAGAACTCGGAGACG
umc1065 2.06 U82230 ACAAGGCCATCATGAAGAGCAGTA CACGGTCTGGCACACTAACCTTAT
umc1079 2.06 G44735 AGCACACATGCACAACATCTTACA CGTTGGGCCATGACTTTCTTTA
umc1080 2.06 G44737 GAGGAGAAAAGGAGATGGAAAAGC AGATGCCGCAGAAGATTCTAAACA
umc1658 2.06 AGAGATGGGGTAGAAATAGACGGC CTCTCTGCTTTCTCTTCTCTTGCG
umc1923 2.06 GTGATGGAAGAAGGGCTACAGATT GGTATAGTATGGTCCGACACGGTT
umc1042 2.07 G44696 AAGGCACTGCTACTCCTATGGCTA CTGACCTTTGAATTCTGTGCTCCT
umc1554 2.07 AW066844 TCTTCTAGAATCCAAAGGCACAGC GTAGCAGCAACTTGCAGGTGATAG
umc1560 2.07 AW066244 CGTTCGTCTCTGGGTAGCGTAG TATAACAGCCTGCTGCTGCTTG
umc1637 2.07 GTTCCAGTTCAGCTTCCAGCA CTGTCGTGTACAGCATCACTTCTG
umc1230 2.09 G54898 GCGATTTCAACTATTTGTGGTAAAGG GTACGACCGTTGAAACTGTTGTTTT
umc1256 2.09 AI987546 CATCTCGACCTTTGACATTCTCCT AGAAGACGATGATGATGATGCAGA
umc1551 2.09 AW067107 CACCGGAACACCTTCTTACAGTTT CGAAACCTTCTCGTGATGAGC
umc1780 3.01 AW360685 CTGTCCCCAGGTTGCTGTAGTAGT CATGATGTACCCGCAACAAATG
umc1300 3.05 AI947741 TCTGAACGCACTGGGAACATAGTA AGAATAATGGACGGTTCCTCTGG
umc1307 3.05 AI943906 GTACGGGTGAAGAGAACAGGTCAA ATCTTCTCTGTTTTGGTCCCTTCC
umc1286 3.06- 3.07 AI987404 ACCGGACCGGATCTTTATCTTTTA GAGGTTATTTCTCCGCAACTCGAT
umc1400 3.06 AI795298 TTACCAATTGTATCCATCACACCG ACAACATAGCAGCCATCCTACTCG
umc1644 3.06 CCATAAACTGTTCCTTTGGCACAC CTTTCACGTGTTAAGGGAGACACC
umc1674 3.06 ACGAGGTCCACGACTATGGATCTT AGTAGTACACGGCTGACGGCAC
umc1730 3.06 AW573320 GCGCTGCCAACTGTATCTTTATCT AAGTTACTCACGGTGCAGAGTTCC
umc1659 3.07 CAAGCTTGCTACTGTGATTTCTCG AACTTCTCGGTGATCTTGTCCATC
umc1825 3.07 ACTCAAGAGCAGACTGCAAAACCT CGTGCATGTATTGTTTGTCCTAGC
umc1273 3.08 AI948095 GTTCGCTGCTGCTTCTTATATGCT AATTGGCGCAGGCTATAGACATTT
umc1052 3.09 AI372100 GTGTACAACACCAGCAACAGCTTC GTAGCTCCCCATCTTGTCGAAC
umc1639 3.09 CTAGCCAGCCCCCATTCTTC GCAAGGAGTAGGGAGGACGTG
umc1669 4.01 ACGAGGGCTTCTTCTCTGAGC GTTTCCTTCTTCATGCGACGAC
umc1294 4.02 AI948003 GCCGTCAACGGGCTTAAACT GCCTCCAGCTCTCTCGTCTCTT
umc1509 4.02 AW172105 CTTTCTGCAGATTCACCGTTTCTT TTGGTTCTTTTGACCATAGACAAGC
umc1117 4.04 AI691779 AATTCTAGTCCTGGGTCGGAACTC CGTGGCCGTGGAGTCTACTACT
umc1390 4.04- 4.05 AI833614 CCTCGAAACAGATGCCTGAGTC AAATGATCCCGAAGCCTGAGAC
umc1652 4.04 GAGAGCAGTAGCACTGACCCTTTC CACTCGACCTCGATCGGAAC
umc1088 4.05 G44744 TCATCCTCCTAGCTCCTCTACTCG AAAACAGTCAGCAGAACCCACTTT
umc1142 4.05 AI649544 CCGAAAACCCATTCTTCTAGCATC GTGCGGTGTTCTCTCTTTCACTCT
umc1317 4.05 AI920379 GCTAATGTTGCCTGTTGGCATAG CCGACTCCGAGTAGCTTTCGT
umc1346 4.05 AI881378 TCTGATCTCTTCGGTGCTAGAGAAA AAGAGATCTCCCAACCCTAACTGC
umc1382 4.05 AI948008 AAGAAAACAGGTAACGGGCATGTA TGGAATTCTTCTGACTACCCCAAG
umc1662 4.05 CCTTCTTCCTTCACGCCTCTTT GACCACCTCATCTCTGACTCTGG
umc1945 4.05 GCGTACTGCTGGTGGTGATG TGGGACCCCTAACTACTACGGC
umc1953 4.05 BE186707 AAGCAGAAGCGAGACACTAACACA GATCGATCGACGATTATGGATCTC
umc1964 4.05 BE056946 CTTCTCACTGTCGCAGAACAAGAG CCGTATGTGTGTACTGTGGATTCAT
umc1969 4.05 BE051731 CTCGAGCCCAGCAGAGAAAG GGTGGAGCCCATGGCTATTACTAT
umc1651 4.07 GATGGTGGTTATGAATGCATGTGT AGACGACGAAATTAACCAGCCATA
umc1466 4.08 AF069911 CGAATAGTGGTCTCGCGTCTATCT GATCCACTAGGGTTTCGGGGT
umc1476 4.08 AI770848 CTCTGCCTCAGTCTGGTCGC CGAGGAAAGGAAGGAGAGCG
umc1775 4.08 A85077 GAGGACAACGCTGCTATTCTCG GGAACTCCGTCAAAATCCCATC
umc1101 4.09 AI715011 GCTGAAAAACGGAGTTCATATGGT AAGCTTATCCACCTCGAGGAAAAC
umc1574 4.09 AJ011615 TTTCATGTGCTTGCAGAGTTTGAC GTCATGCAAGTATCCGCTGTCTT
umc1623 4.09 AJ011615 TCCAGCAGAACACCAACCTATTAGA GAGACCAGCAGGTAGTTCTTGGAA
umc1631 4.09 CATGAATAAAGATGGATGCTGGTG GGAAAAACAAAGAAGCATAGTAGACAGC
umc1643 4.09 ATCACCACATCCGTTGCAAAT CTAGAATCTCGTAGAGGCTCCTGC
umc1940 4.09 AACAACAAATGGGATCTCCGTTAC CCATCTGCTGAGGGCTTATCTG
umc1999 4.09 GTCCCATCTGCTGAGGGCTTAT ACAACAAATGGGATCTCCGTTACA
umc1503 4.10 AW215967 TTCATGACACACAAACCACAGATG GCACCCTAGCAGACTACAACATCC
umc1050 4.11 AI374559 CGATACACATCCATCTTCAGGTAGC GCCTTTGTACCAATACAAGCCAAG
umc1610 4.11 AW244910 CTTGAGATCTGTGGCGTCGTC CGTCTCCTCCATCTCTACTCGTTC
umc1719 4.11 AW600623 CCTGGAAGCACCACTGATACTAGC AGCTCCAGCCTGCCTACCAG
umc1163 5.00 AF105716 AACTAGAGGACACGCAGACTTGCT GTTCTGCAGGGAAGAAGCAGC
umc1761 5.02 AW355888 GGCTTGTAGTTGGAGTGGTCGTAG AGCAGCTTCAGAGGAGGAAGAAG
umc1056 5.03 AF037031 CGGATCGCTTTTTACCGTCTATAA AGCAAGAGTAGCGTTCCATTTCAG
umc1151 5.03 AI612267 GATCCATAGCGCTAGTGCACTCTT ACTGCCGGGTGGCTAATGAT
umc1373 5.03 AI881480 ATGATGATGACGACGACGAAGAT CGTCAGGTCTGTTGCATATCTGTT
umc1482 5.04 AI739789 GAACAAAGAATCACAACACGATGC CAGGTTCTGAGGAAAGCAAGGTT
umc1575 5.04 AJ011614 GCCTAGACGTCATGGACAACG GAGTCGAGACTGCCGTCCTTC
umc1629 5.04 GCTCCAAGTtcgtcgtcgtc CTCACGACCTTCTTCTTGCACAC
umc1815 5.04 AW424827 ACATACAGGTCACAACTCACAGCG GCTGCCTTCTTCCTTCTCTTCTCT
umc1019 5.06 G10810 CCAGCCATGTCTTCTCGTTCTT AAACAAAGCACCATCAATTCGG
umc1375 5.07 AI881341 AGTTCGACTTCGACCCGGAC GTCAGGCTTCTTCTCGACACACC
umc1646 5.07 GCAATTATGAACAGTTGCGTGTGT AGTGGATCGATCGAACATGACTTT
umc2013 5.07 GGGACGAGAGTCTGTTGTTGTTG GTTGATGCATGTGACTCTGGAAAC
umc1829 5.09 GTTGATTGGTTGATGTGGAAACAA CAGTTTGATGTTCATGGCTCTCTC
umc1883 6.00 GAATAATCAATCCATCGATCTCGC AACTGCTGTGGATGAAAGAGGAAG
umc1996 6.00 AW787579 CTCGTCGTGTTAGTCGTGAAGC CAGAAGCTCATACGGGTTCTCCT
umc1186 6.02 U10076 TCAAGAACATAATAGGAGGCCCAC AGCCAGCTTGATCTTTAGCATTTG
umc1517 6.01 AQ845168 TAACACTCGGAACCTTCCTTCTC GATGGGAAAATGTGTGGAATTTAT
umc1832 6.01 GATGCTCGAATTTGTGATGAATGA TGTGTACCAAACTTCATGGTGGTC
umc1083 6.02 G44740 CTTTCCTCTCTGGAGCGTGTATTG ATATGTTGCAGAACCATCCAGGTC
umc1178 6.02 AF019146 CTGTCGTAAGAGCGCCAACAG GTCTGAACGATGAACAGTACACGC
umc1628 6.02 GGCTGTAATGCAGGAGATTGAGTT ACTCACGTCACAACTACCGTACCA
umc1656 6.02 AGTTTTGACCGCGCAAAAGTTA GTACGAGCAGGCCATTAACCC
umc1614 6.04 AW163864 GAGCTACTCAGCCAAGACGAAAAG TCACTTGCATGAGCAACTTCAGTA
umc1796 6.04 AW562820 CGCTGAGGCTTAAGATGGTGTT AACGCCTTTACGAGCACGAAC
umc1918 6.04 CACAAGAACATTATGACGACCGAG AAGCAGGAGACATCGTTTAAGTCG
umc1795 6.05 AW330572 CCCTCTCTTCCTAGGTTCATCGTT CAGCGGCGTCTTGAAGAGTAG
umc1341 6.05- 6.06 AF073330 GTCTACCAGGACGTTTACCTGTGG CCTCAATCCTTTGTGGACAAACAC
umc1859 6.06 ATATACATGTGAGCTGGTTGCCCT GCATGCTATTACCAATCTCCAGGT
umc1912 6.06 ACGAAGGTAGTCCATCAACTGCAC GACGGGGGCTGTAGGTTCTG
umc1248 6.07 AW000535 CTTTGTCCATCGGCTTTATTCTTT CACATTAAGTTACAAATACAAATCACCG
umc1296 6.07 AI947918 CTCTCCCGGCTCTGACCTAGC GCTGGAGATAGGCATCCAGACAC
umc1621 6.07 AW066892 AGACTCTGAGGAGGTAGACGCTGA GACTCGGAGGCCTTCTACATGAT
umc1653 6.07 GAGACATGGCAGACTCACTGACA GCCGCCCACGTACATCTATC
umc1127 6.08 AI677270 GGTCCAGTGACATCTCAAAATGAA ATATTCCCCCTCCCTAATTTTGCT
umc1426 7.00 AI745774 TAGGGTCGATTCTGGATTGTCTG TGTAAAACAGAAAGCATGCGAGTC
umc1480 7.00- 7.02 AI746088 AATGAAGGTGGATGTGCTGCTACT CTTCCCCATCTCCTCTTGAAGATT
umc1642 7.00 CACTACAGCGCCTGTAACTGCC CATGAGCTAAGCAAGAGGGGTATG
umc1672 7.00 CTTTGTTCCAGATCCATCTTTTCG CCTAGACCCCACTCATGTGGTAAC
umc1694 7.00 ATCATTCTGCAGGTCACGAGAAG AGAGACGAAAACCGACCATTCAT
umc1068 7.01 G10755 AGTCGTTTTCAAAGGCTGCTGATA TGAGTCACCTCATTTCTTCTGGTTC
umc1409 7.01 AI770780 GCTAGTAGACATCGACGGATCGAC ATGACGTCCAGGAGGATGACC
umc1428 7.02 AI745868 CTATCTCGGTAACTCCCACCAAAG GTTACTACCGTGATGAAACGAGGG
umc1549 7.02 AW067361 ATTCACTCTTGCATTGCCTCTACC ATGAACGAGTCCAGGAGTTTCTTG
umc1666 7.02 TTATTGCCCTCCCTGTTCTTGTT ACCTTGACGCAGCAATCCTC
umc1927 7.02 AAGACAAATGGTTCTCTTCTATTGTTG CGCCTAAAAAGCAAATGAGAGTTA
umc1932 7.02 ACTTGCGCATATAAGTCGGGATG AGGATTAACGATGAGGAGCCTCTG
umc1015 7.03 CAGACACAAGCAGCAAAGCAAG TCCGACTCCAAGAAGAGGAGAA
umc1112 7.03 AI711634 TTGGGTTCAGTTTTCACAACCTTT AAGATGATTACTAACTCGCGGCAG
umc1888 7.03 TCCAAAAATGTTTCTGCTGAATGT TGCTTGAAAAATCTTGATCAGCTC
umc1936 7.03 GAGCTCATGTGTATGTGGACGTTG AATAAACAGAGGTAGGTCAGGTCGC
umc1125 7.04 AI677562 CGTCCGACATCTTGCTTTTCTATC TTTTACTTCTCAGCGGTAGATCGG
umc1684 7.04 GAGCTAGCTTTTTGCTTTGCTCAC AAGGGGCCCAGGTACTTGAC
umc1944 7.04 GAAGAAGGATCGCACACATGG AGACTGTCGCGCTGTACTATACCC
umc2001 7.04 TGAAGAAGGATCCGCACACAT AGACTGTCGCGCTGTACTATACCC
umc1671 7.05 AGCGGAGGAGAGGGAGGTTAT AAGTCCAGGTACCTCAGCTTCG
umc1799 7.06 GTGATGAATAATGTCCCCAATTCC GGACAGATGTCTGGAGATTGCTTT
umc1075 8.01 AI396125 GAGAGATGACAGACACATCCTTGG ACATTTATGATACCGGGAGTTGGA
umc1139 8.01 AI665279 TTTGTAATATGGCGCTCGAAAACT GAAGACGCCTCCAAGATGGATAC
umc1327 8.01 AI881644 AGGGTTTTGCTCTTGGAATCTCTC GAGGAAGGAGGAGGTCGTATCGT
umc1483 8.01 AI737407 GTTAGGGGGTAGAAGACAGGGATG GTTCAAGGCCATTGTAATCCTCCT
umc1592 8.01 GACCATATGTGCTCCAAAACCTTC AAGCTTCTTCGGTCTTTGTAGGGT
umc1786 8.01 AW288952 ACCGTGACTTCCTCCTCATAACTG CATTTTTCGCATTTAGGAAATCCA
umc1817 8.02 AW400071 CTACGCAGGCTTCAACCACC GTACTGGTGATGATGGTACCCCTG
umc1868 8.02 CCATCATGGAGTTGCGGTTATTTA CCCATAGAGTGCTTGAAATTGTTGA
umc1289 8.03 AI979643 AGTTATCCATCATCTTGCGGGTTA ACGCTTGGCTCTCTAGTGGCTTAT
umc1615 8.03 AQ844362 GATGGTGGTAGGTGGAATCTGC AAACTCCTGTGAGCTGTCTGTCG
umc1617 8.03 AW129849 GATGCACCACAGTAGAGGAGGAAT GAAGATGAGGTTCAGGAAGGACAA
umc1735 8.03 AW585263 GCGCACAATATAATGAACCAACAG TTTGCCAAAAAGACATGACACCTA
umc1741 8.03- 8.04 AW424565 AGACGAACCCACCATCATCTTTC CGCTTGGCATCTCCATGTATATCT
umc1765 8.03- 8.04 AW331078 AGATCGTGAGGACCATCAGCAG GAGAGATCCATCGTCAGTCGTAGC
umc1778 8.03 AW424513 GTGAACCATTGTAGCTGTCCCTG GAGCTCGTACCTGTTCATGAGGAT
umc1802 8.03 TTCCTGACAAGAAAAATATAACAGTGG TTTCACAGTAGTGTCAGAAAGAGTTCA
umc1130 8.04 AI670662 TTGGGACTCATTACTTCCGGACT GCTAGGGGAAAGCTCGTACTATGG
umc1309 8.04 AJ238507 CTCTCATTAGTTCGTGCCAGTCAA CCAGAAATCAGAGGAAGCTCTCAG
umc1665 8.05 CAATCAGGAGCCAGGGAGATG CTTAAACTTGTCGAGACGGTCCTG
umc1670 8.06 CCTAGGAATAAGATCGCAGGCTTT ATTGTCGACTACAGAGAAGACGCC
umc1728 8.06 AW573317 AGTACTTTCAGGCAGGGACCTTCT AACGCACTTCTTGTAGCTGTAGGG
umc1384 8.07 AI834156 GGCCTAAAACTACATGCACACACA AGCTTATAAAGGACGGGTCGGTAA
umc2014 8.07 CATTTCACGAGCTCTAGAGAGGGA AGTACAAGAAGGCATGGAGCTCAG
umc1032 8.08 G44393 ACATTAGTTGCGTCCTTACCGAAG GAAGCGACCATAACATGTGAGAGA
umc1069 8.08 M16900 AGAGAATCCCCAAGCAAACAAAC CTTCATCGGAGCCATGGTGT
umc1673 8.08 AAGCTCAAGCTCCTAGCTCTTCCT GAGGAGCGTCTCCAGAAGGAC
umc1638 8.09 AGGTGACCTCGACGTCCTACG GAGGGGAACAAAGACTTGACGTT
umc1663 8.09 GCTTGCACTAGCTTTAGCTCCATC CGGGATCAGTCGTTACAAACATAG
umc1588 9.02 AW052800 TGACAACAGCTATGTGTCTGCTCC GGATGAAGCAAACCAAGCACATAC
umc1596 9.02 AW057036 CGGCGAGGATAACATGCAGTA TCTTGAGCTGAACACTGATCTTGG
umc1636 9.02 CATATCAGTCGTTCGTCCAGCTAa GTACTGGTACAGGTCGTCGCTCTT
umc1267 9.03 AI974888 TTACAACACGCATGCATCTAGCTT AACAACAAAGAACTCACCAGCCTC
umc1420 9.03 AI746245 AAGACGACCTCGTTTGTAGCCTC GTATTTCAACAGCTGGGACGGT
umc1570 9.03 AJ011617 CAGGAGATGATGAGCGGGAG GTCGTAGAGGTGGTGCTGCTG
umc1571 9.03 AJ011617 GCACTTCATAACCTCTCTGCAGGT CACCGAGGAGCACGACAGTATTAT
umc1634 9.03 TCCGTTGAGGACACTCGAATTTAT GTAGCCTGCAAAACATCCAAGAAC
umc1522 9.04 AQ844644 GAGAATACTGTACCGGTCTGTCCC GAGGAGGGGAAATAAAATGGGTAG
umc1771 9.04 AW330595 CATCAGGAAGGAAGACGACTAGGA GTGAAATGTTGTTTCCAATGCAAG
umc1387 9.05 AI833929 GCTAGGTGCTTATCTCGGTTTTCA AAGAAGCTGAACCTAAGACAGCCA
umc1417 9.05 AI770379 GAATCCTGGTTGGCCTTTCC ACAGCTGAGAACGCATTAGCAAG
umc1494 9.05 AW231326 CCACAGCAGCTCAGCTCGTC GACGACCGCTACTTCTTCAGCA
umc1654 9.05 CACATTGATCAACTACCAGGTGGA GCCTCTTTTCTTCTCCCATTTTCT
umc1657 9.05 ATGGATGAATATGATCCCACGG GATCCGCACGTAGCTTTTCG
umc1789 9.06 AW267353 ACCTCTCCTTTTTCCTCGCCTT GTCAGAGAAGAGGCCGGGTC
umc1104 9.07 AI714928 CAACAATTCCAATCATGGCACTAA GTAACTCTGGTGAACTCAGAGGGC
umc1380 10.01 AI855154 CTGCTGATGTCTGGAAGAACCCT AGCATCATGCCAGCAGGTTTT
umc1152 10.02 AI612250 CCGAAGATAACCAAACAATAATAGTAGG ACTGTACGCCTCCCCTTCTC
umc1047 10.03 AGGAAAGAAGGTAACCCATGCACT GGCGAGTTAGAGGAGTCAGACACA
umc1648 10.04 CTGCAGTACGTGAGCCTGTACG GCTTGAGCTGTGAGGAAGTTTTG
umc1280 10.05 AI979671 AAAATCCATGGCTTCTTTCTTTCC AACAGCCAGTTTTGGGCTGTATAA
umc1402 10.05 AI770929 TACACGCAGCTCTGGGTTTTG GTGATCCGGGTAGAGGAATGTG
umc1507 10.05 AW181192 GATTCAAACCAAACACTTTTCCCA CGAACCTTGCTGTGTGTTTATCAG
umc1678 10.05 GTAGAGATCGATTCGCTAACCTGC AGTTGTTCCGTTCCGTCCTTATC
umc1827 10.05 GCAAGTCAGGGAGTCCAAGAGAG CCACCTCACAGGTGTTCTACGAC
umc1898 10.05 ACGAGCAGCAGTCTCTTGGG ACATGGGGCACAAGAAGCAAT
umc1569 10.07 AB031012 GCAGCTCCAAGTACAGAGGTGAG CACTGCAGACACGTAAAATCCAAG
======================
---
More information about the Maize
mailing list
Send comments to us at
archive@iubioarchive.bio.net
