CALL FOR COLLABORATION
STRUCTURAL SIMILARITY, DNA OR PROTEIN ALIGNMENTS, PHARMACOPHORES
I have built a program which aligns molecules and extracts the maximal
common 3D substructure. It handles up to some thousands of atoms and is
able to work with incomplete data (fragments of molecules).
The usual input data for my program is the set of cartesian atomic
coordinates of the molecules or fragments to be aligned.
People looking for structural alignments or pharmacophore identifications
are welcome to send me their data, together with a brief description of
their scientific project.
I assume that all data and results are confidential. If you find that
the my program outputs some satisfactory result, I hope that we try to
publish it.
Information: please contact:
Michel Petitjean, Email: petitjean at itodys.jussieu.fr
ITODYS (CNRS, URA34), ptitjean at ccr.jussieu.fr
1 rue Guy de la Brosse, Phone: +33 (1) 44 27 48 57
75005 Paris, France. FAX : +33 (1) 45 84 98 25
