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protein molecular surface residues

Andrew Dalke dalke at ks.uiuc.edu
Mon Mar 3 15:49:36 EST 1997


Michel SEIGNEURET <michel at biophy.jussieu.fr> asked for a program that
> computes the molecular
> surface of a protein from its PDB file but also gives a list of the atoms
> that contribute to this molecular surface.

The three I've run across are:
  MS from Connolly; http://www.biohedron.com/msp.html
  MSMS from Michael Sanner in Olsen's lab at Scripps;
http://www.scripps.edu/pub/olson-web/people/sanner/html/msms_home.html
  Surf by Amitabh Varshney when at UNC;
ftp://ftp.cs.unc.edu/pub/projects/GRIP/SURF/surf.tar.Z

  There are, of course, many more.

						Andrew



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