IUBio GIL .. BIOSCI/Bionet News .. Biosequences .. Software .. FTP

PDB superposition and RMSD

Michel PETITJEAN ptitjean at ccr.jussieu.fr
Fri May 14 02:52:19 EST 1999

In article <Pine.GSO.3.96.990513142514.12976H-100000 at suma3.reading.ac.uk>
"l.r.cooper" <ssr97lrc at reading.ac.uk> wrote:
>dear all,
>does anyone have a piece of code which superimposes two PDB files then
>reports their RMSD in angstroms?
>will summarize

The CSR algorithm computes the common 3D motif then reports the RMSD
of the common motif pair.
I can email you the code for DEC-alpha, SGI, RS6000, CRAY (indicate
the exact platform and system version).

Michel Petitjean,                     Email: petitjean at itodys.jussieu.fr
ITODYS (CNRS, ESA 7086)                      ptitjean at ccr.jussieu.fr

More information about the Molmodel mailing list

Send comments to us at archive@iubioarchive.bio.net