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How do you create EMBOSS files?

Simon Andrews simon.andrews at bbsrc.ac.uk
Fri Feb 1 11:35:50 EST 2002


husam wrote:
> 
> hi, I'm trying to configure staden to run emboss commands with
> create_emboss_files.tcl.
> 
> Both staden and emboss are installed on my machine(redhat 7.2, on a i386
> pc). Both packages work fine separately. But, when I run
> create_emboss_files.tcl I get the following error messages:
> 
> [earth linux-bin]# ./create_emboss_files
> Error in startup script: couldn't execute "embossdata": no such file or
> directory

You probably need to have the EMBOSS bin directory in you path. What
happens when you try to run embossdata from the command line?  What
happens when you run "which embossdata"?

How you alter your path will depend on what shell you are using.

Hope this helps

Simon.




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