GBINV.SEQ Genetic Sequence Data Bank 15 June 1997 NCBI-GenBank Flat File Release 101.0 Invertebrate Sequences 27363 loci, 95938006 bases, from 27363 reported sequences LOCUS AA18SRN 1079 bp DNA INV 11-OCT-1993 DEFINITION A.australis gene for 18S ribosomal RNA (partial). ACCESSION X74761 NID g407086 KEYWORDS 18S ribosomal RNA. SOURCE Sahara scorpion. ORGANISM Androctonus australis Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthidae; Androctonus. REFERENCE 1 (bases 1 to 1079) AUTHORS Chalwatzis,N., Baur,A. and Zimmermann,F.K. TITLE A 18S ribosomal RNA gene fragment of the scorpion Androctonus australis compared with the b spider Eurypelma californica JOURNAL Unpublished REFERENCE 2 (bases 1 to 1079) AUTHORS Chalwatzis,N. TITLE Direct Submission JOURNAL Submitted (20-AUG-1993) N. Chalwatzis, TH-Darmstadt, Inst. fuer Mikrobiologie/Genetik, Schnittspahnstr. 10, 64287 Darmstadt, FRG FEATURES Location/Qualifiers source 1..1079 /organism="Androctonus australis" /dev_stage="adult" /tissue_type="muscle" /clone="pNCO1Aa18S" rRNA <1..>1079 /product="18S ribosomal RNA" BASE COUNT 276 a 246 c 295 g 262 t ORIGIN 1 cagcagccgc ggtaatacca gctccaatag cgtatattaa agttgttgtg gttaaaaagc 61 tcgtagttgg atctcagatc cggagctgcg gtccaccgcc cggtggttac tgtagcgacc 121 ggacgtttgg ccggattcct ttgatgctct ttgccgagtg tcttgggtgt ccggcacgtt 181 tactttgaaa aaattagagt gctcaaagca ggcgtaccgc ctgaataatg gtgcatggaa 241 taatggaata agacctcgtc tctattttgt tggttttcgg aaaacgagga aatgattaag 301 agggacagac gggggcattc gtattgcgac gctagaggtg aaattcttgg accgtcgcaa 361 gacgaactac tgcgaaagca tttgccaaga atgttttcat taatcaagaa cgaaagttag 421 aggttcgaag gcgatcagat accgccctag ttctaaccat aaacgatgcc aaccagcaat 481 ccgcctgagt tcctcaaatg actcggcggg cagcttccgg gaaaccaaag tgtttgggtt 541 ccaggggaag tatggttgca aagctgaaac ttaaaggaat tgacggaagg gcaccaccag 601 gagtggagcc tgcggcttaa tttgactcaa cacgggaaaa cttacccggc ccggacactg 661 gaaggattga cagattaaga gctctttctt gattcagtgg atggtggtgc atggccgttc 721 ttagttggtg gagcgatttg tctggttaat tccgataacg aacgagactc tagcctacta 781 aatagacgaa cgatcactgg agtcgttcga tcttcttaga gggacaagcg gcttttagcc 841 gcacgagaca gagcaataac aggtctgtga tgcccttaga tgtccggggc cgcacgcgcg 901 ctacactgaa ggaatcagcg tgcgtttacc cctgtccggc aggactgggt aacccgatca 961 acctccttcg tgatagggat aggggcttgt aattcttgcc cttgaacgag gaattcccag 1021 taagcacgag tcataagctc gtgttgatta cgtccctgcc ctttgcacac accgcccgt // LOCUS AA18SRRN 1812 bp DNA INV 01-MAR-1994 DEFINITION A.australis gene for 18S ribosomal RNA. ACCESSION X77908 NID g457449 KEYWORDS 18S ribosomal RNA. SOURCE Sahara scorpion. ORGANISM Androctonus australis Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthidae; Androctonus. REFERENCE 1 (bases 1 to 1812) AUTHORS Chalwatzis,N., Kinzelbach,R. and Zimmermann,F.K. TITLE Complete sequence of a Scorpion 18S rRNA gene JOURNAL Unpublished REFERENCE 2 (bases 1 to 1812) AUTHORS Chalwatzis,N. TITLE Direct Submission JOURNAL Submitted (24-FEB-1994) N. Chalwatzis, Technische Hochschule Darmstadt, Institute fuer Mikrobiologie, Schnittspahnstr. 10, 64 287 Darmstadt, FRG FEATURES Location/Qualifiers source 1..1812 /organism="Androctonus australis" /dev_stage="adult" /clone="pNC07And18S" primer_bind 1..22 /note="PCR primer 18S0000" primer_bind 1785..1812 /note="PCR primer 18S1900" BASE COUNT 470 a 410 c 491 g 441 t ORIGIN 1 tacctggtgg atcctgccag tagtcatatg cttgtctcaa agattaagcc atgcatgtct 61 aagtacatac cgaaataagg tgaaaccgcg aatggctcat taaatcagtt acggttcctt 121 agactgtact ttcctacttg gataactgtg gtaattctag agctaataca tgcatcagag 181 ctccgacctt cggggacgag cgcatttatt agaccaagac caatcggact taggtccgca 241 aactgtggtg actctggata actttgagct gatcgcacgg tctagcaccg gcgacgtatc 301 tttcaagtgt ctgccttatc aactttcgat ggtaggttat gcgcctacca tggtcgttac 361 gggtaacggg gaatcagggt tcgattccgg agagggagcc tgagaaacgg ctaccacatc 421 caaggaaggc agcaggcgcg caaattaccc actcccggca cggggaggta gtgacgaaaa 481 ataacaatac gggactctat tgaggccccg taattggaat gggtacaatc taaacccttt 541 aacgagtatc cattggaggg caagtctggt gccagcagcc gcggtaattc cagctccaat 601 agcgtatatt aaagttgttg tggttaaaaa gctcgtagtc ggatctcaga tccggagctg 661 cggtccaccg cccggtggtt actgtagcga ccggacgttt ggccggattc ctttgatgct 721 ctttgccgag tgtcttgggt gtccggcacg tttactttga aaaaattaga gtgctcaaag 781 caggcgtacc gcctgaataa tggtgcatgg aataatggaa taagacctcg tctctatttt 841 gttggttttc ggaaaacgag gaaatgatta agagggacag acgggggcat tcgtattgcg 901 acgctagagg tgaaattctt ggaccgtcgc aagacgaact actgcgaaag catttgccaa 961 gaatgttttc attaatcaag aacgaaagtt agaggttcga aggcgatcag ataccgccct 1021 agttctaacc ataaacgatg ccaaccagca atccgcctga gttcctcaaa tgactcggcg 1081 ggcagcttcc gggaaaccaa agtgtttggg ttccagggga agtatggttg caaagctgaa 1141 acttaaagga attgacggaa gggcaccacc aggagtggag cttgcggctt aatttgactc 1201 aacacgggaa aacttacccg gcccggacac tggaaggatt gacagattaa gagctctttc 1261 ttgattcagt ggatggtggt gcatggccgt tcttagttgg tggagcgatt tgtctggtta 1321 attccgataa cgaacgagac tctagcctac taaatagacg aacgatcact ggagtcgttc 1381 gatcttctta gagggacaag cggcttttag ccgcacgaga cagagcaata acaggtctgt 1441 gatgccctta gatgtccggg gccgcacgcg cgctacactg aaggaatcag cgtgcgttta 1501 cccctgtccg gcaggactgg gtaacccgat caacctcctt cgtgataggg ataggggctt 1561 gtaattcttg cccttgaacg aggaattccc agtaagcacg agtcataagc tcgtgttgat 1621 tacgtccctg ccctttgtac acaccgcccg tcgctactac cgattgaatg atttagtgag 1681 gtcttcggac tggcgctcgg agcggcctta ctggtcgcgc cggcgtgccg gaaagatgac 1741 cgaacttgat tatttagagg aagtaaaagt cgtaacaagg tttccggagg tgaacctgca 1801 gaaggatcat ta // LOCUS AA18SRRNA 1950 bp DNA INV 05-SEP-1991 DEFINITION Aedes albopictus gene for 18s rRNA. ACCESSION X57172 NID g5552 KEYWORDS 18S ribosomal RNA. SOURCE forest day mosquito. ORGANISM Aedes albopictus Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Aedes. REFERENCE 1 (bases 1 to 1950) AUTHORS Baldridge,G.D. TITLE Direct Submission JOURNAL Submitted (10-JAN-1991) G.D. Baldridge, UNIVERSITY OF MINNESOTA, DEPT OF ENTOMOLOGY, HODSON HALL, 1980 FOLWELL AVE, ST PAUL MINNESOTA 55108, U S A REFERENCE 2 (bases 1 to 1950) AUTHORS Baldridge,G.D. and Fallon,A.M. TITLE Nucleotide sequence of a mosquito 18S ribosomal RNA gene JOURNAL Biochim. Biophys. Acta 1089 (3), 396-400 (1991) MEDLINE 91316143 FEATURES Location/Qualifiers source 1..1950 /organism="Aedes albopictus" /dev_stage="larvae" /cell_line="ATC-15" /clone_lib="EMBL3" /clone="E5" /chromosome="3" rRNA 1..1950 /product="18S rRNA" BASE COUNT 545 a 399 c 495 g 511 t ORIGIN 1 attctggttg atcctaccag taatatacgc ttgtctcaaa ggttaagcca tgcatgtcta 61 agtacaaaca gatttaatgt gaaaccgcat aaggctcagt ataacagcta taatttacaa 121 gatcatttaa ctagttactt ggataactgt ggaaaatcta gagctaatac atgcaaaatg 181 caggaacctc gcggaacctg tgcaattatt agtcaaacca atcgtcctcc gtgacgctgg 241 agttgaaatc tggataattt tgctgatcgt atggtctcgc accgacgaca gatctttcaa 301 atatctgccc tatcaactat tgatggtagt atagaggact accatggttg caacgggtaa 361 cggggaatca gggttcgatt ccggagaggg agcctgagaa atggctacca catccaagga 421 aggcagcagg cgcgtaaatt acccaatccc ggcacgggga ggtagtgacg agaaataaca 481 atataagact cttttatgac gtcttataat tggaatgagt tgagcataaa tccttcaaca 541 aggatcaagt ggagggcaag tctggtgcca gcagccgcgg taattccagc tccactagcg 601 tatattaaaa ttgttgcggt taaaacgttc gaagtttatt cttgtccaac acgggtgcta 661 ctcctttatg atggcagtag gtcactggat tgttgcgact ataagactgg gtgcgcccgt 721 cggcctcgcg gtcggcgcgg tcgtagtgtg gcgctgatgc ctttcatcgg gtgcagtgtt 781 tccgcaagcc cagctgctat taccttgaac aaattagagt gctctaagca ggctatccta 841 cggccgagaa taacttgcat ggaataatgg aatatgacct cggtcttaat attcattggt 901 ttgtaatcag atcaagaggt aatgattaac agaagtagtt gggggcatta gtattacggc 961 gcgagaggtg aaattcgtag accgtcgtaa gactaactaa agcgaaacga tttgccatgg 1021 atgctttcat taatcaagaa cgaaagttag aggatcgagg cgattagata ccgccctagt 1081 tctaaccgta aactatgcca attagcaatt gggagacgct acattatggt gctctcagta 1141 gcttccggga aaccaaaatt aggttccggg ggaagtatgg ttgcaaagtt gaaacttaaa 1201 ggaattgacg gaagggcacc accaggagtg gagcctgcgc ttaatttgac tcaacacggg 1261 aaaacttacc aggtccgaac ttattgaggt aagacagatt aatagctctt tctcaaaatt 1321 aagggtagtg gtgcatggcc gttcttagtt cgtggaatga tttgtctggt taattccgat 1381 aacgaacgtg actcaatcaa attaaataga acgctatcag cagtcagatg tttgataccg 1441 acggttcggg caacggtcgc tcgcgcgtcg cgctcggccg gcggtgtagt gtgacctgat 1501 aatacgtcaa cccatcgtgg ttgacttctg cttaatagga caatttgtgt tcagcaaaat 1561 gagattgagc gataacaggt ccgtgatgcc cttagatgtt ctgggctgca cgcgcgctac 1621 aatgtgcgca gcaacgcgta tccttgcccg aaagggccgg gaaatcgctt aaatgcgcat 1681 ttagtcggga tgaaatggtc catatgaacc tggaattcca gtaagtgctg gtcattagct 1741 agcgttgatt acgtccctgc cctttgtaca caccgcccgt cgctactacc gatggattat 1801 ttagtgaggt ctttgaaggt gaacatttgc tagtccctcg ggattacatt tgaatcgctg 1861 aagttgaccg aacttgaccg aacttgatga tttagaggaa gtaaaagtcg taacaaggtt 1921 tccgtaggtg aacctgcgga aggatcatta // LOCUS AA58SRRN 155 bp DNA INV 06-APR-1994 DEFINITION Aedes albopictus gene for 5.8S ribosomal RNA. ACCESSION Z16413 NID g296930 KEYWORDS 5.8S ribosomal RNA; ribosomal RNA. SOURCE forest day mosquito. ORGANISM Aedes albopictus Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Aedes. REFERENCE 1 (bases 1 to 155) AUTHORS Kjer,K.M., Baldridge,G.D. and Fallon,A.M. TITLE Mosquito large subunit ribosomal RNA: simultaneous alignment of primary and secondary structure JOURNAL Biochim. Biophys. Acta 1217 (2), 147-155 (1994) MEDLINE 94153990 REFERENCE 2 (bases 1 to 155) AUTHORS Kjer,K.M. TITLE Direct Submission JOURNAL Submitted (05-OCT-1992) Karl M Kjer, Entomology, University of Minnesota, 219 Hodson Hall, 1980 Folwell Avenue, St. Paul, Minnesota 55108, USA FEATURES Location/Qualifiers source 1..155 /organism="Aedes albopictus" /strain="N/A" /isolate="cell culture" /tissue_type="minced neonate larvae" /cell_line="C7-10" /clone="C7-10" rRNA 1..155 /product="5.8S ribosomal RNA" BASE COUNT 44 a 41 c 38 g 32 t ORIGIN 1 aaccctaggc aggggatcac tcggctcgtg gatcgatgaa gaccgcagct aaatgcgcgt 61 cagaatgtga actgcaggac acatgaacac cgacacgttg aacgcatatt gcacatcgta 121 cctccagtac gatgtacaca tttttgagtg cctac // LOCUS AAAAGC 348 bp mRNA INV 28-NOV-1994 DEFINITION Anadara trapezia alpha globin mRNA, 3' end. ACCESSION L24375 NID g402358 KEYWORDS globin. SOURCE Anadara trapezia blood cDNA to mRNA. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 348) AUTHORS Nassif,N.T., Mackinlay,A.G. and Thompson,E.O. TITLE PCR amplification of partial mRNA sequences encoding the alpha- and beta-globin chains of the bivalve mollusc Anadara trapezia: correction of the C-terminal amino acid sequence of the alpha-chain JOURNAL Comp. Biochem. Physiol. B, Comp. Biochem. 105 (2), 283-287 (1993) MEDLINE 93365272 FEATURES Location/Qualifiers source 1..348 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon 1..63 /note="Bases 1-30 are PCR-primer sequence and have not been determined independently" /number=2 CDS join(<31..63,64..177) /codon_start=1 /product="alpha globin" /db_xref="PID:g402359" /translation="INRKISGDAFGSIIEPMKETLKARMGSYYSDDVAGAWAALIGVV QAAL" exon 64..177 /number=3 3'UTR 178..>348 polyA_signal 340..345 BASE COUNT 103 a 54 c 73 g 118 t ORIGIN 1 tgtgttgtag aaaaatttgc cgtcaaccat atcaacagga aaatcagcgg tgacgcattc 61 gggtcaatca ttgaaccaat gaaggagaca ctgaaggcca ggatgggcag ttattacagt 121 gatgatgtcg ctggagcatg ggccgctctg attggtgtag ttcaggctgc tttgtaaact 181 atccggataa tggacctgtc tcgtttgaca ttacattgga acaatgtttg atgttagata 241 aggaactaat atacaatttt atcaattaac ttcgtcattg atgttatttt tgtttttatc 301 tataatatga tatttgttat tagttttcct ctataattca aataaaac // LOCUS AAABDA 1759 bp DNA INV 05-AUG-1992 DEFINITION A.aegypti abd-A gene for abdominal-A protein homologue (partial). ACCESSION X67132 NID g5553 KEYWORDS abdominal-A gene. SOURCE yellow fever mosquito. ORGANISM Aedes aegypti Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Aedes. REFERENCE 1 (bases 1 to 1759) AUTHORS Eggleston,P. TITLE Direct Submission JOURNAL Submitted (29-JUN-1992) P. Eggleston, Wolfson Unit of Molecular Genetics, Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, L3 5QA, UK REFERENCE 2 (bases 1018 to 1299) AUTHORS Eggleston,P. TITLE Identification of the abdominal-A homologue from Aedes aegypti and structural comparisons among related genes JOURNAL Nucleic Acids Res. 20 (15), 4095 (1992) MEDLINE 92375703 FEATURES Location/Qualifiers source 1..1759 /organism="Aedes aegypti" /strain="Bangkok" /dev_stage="4th instar larvae" /clone="lambda B3" intron <1..1015 exon 1016..1239 /gene="abd-A" CDS 1016..1239 /partial /gene="abd-A" /codon_start=3 /product="abdominal-A homologue" /db_xref="PID:g5554" /db_xref="SWISS-PROT:P29552" /translation="PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALC LTERQIKIWFQNRRMKLKKELRAVKEINEQ" gene 1016..1239 /gene="abd-A" misc_feature 1033..1212 /gene="abd-A" /note="homeodomain" intron 1240..>1759 BASE COUNT 518 a 430 c 328 g 483 t ORIGIN 1 gaattcgtgt tcaactcaag atttcccatg catttgccag caatattaaa catcatccat 61 cttcccgaac ggcatccttt atggaataaa ataattcctc acgttcctct caatccgtgt 121 gccgattaat gagtttgcgt tcagcaggca tccaactatg ccctctccgg gggagtctct 181 acgctacgta tcgctcatgc ttgatgaaaa gacaatagct tcattacgaa tccttaccac 241 gaccggcaac agacagagca aagaggcagc ggcagcggta tcttgcagag ccaaggatca 301 acatggctct agaatttaat atcgtagccc ataaataatc atccctcgct ccgcccaact 361 cctggcctca acccccgagt gaaagcgctc tttctcctgc catagcagtt gcacgatatc 421 aaagcgtcga gggaactatc caacacgact gattcccttc ttttcttctc gcgcgcagtg 481 gaatcgaata tttacgacta tcatatttta tcatcaatac tccttgtaac atacgacccc 541 tcctctgccc atcggtcggt tctaatcgcc gcgccgtcgt ccgtgcctag cctagggaaa 601 agggtgtgaa agcggccatc ttaagtcaat taactggtcg ttagaagcat ttcttcccct 661 gcgaggctca ccaccaaaaa cgcgaagtat tactcgatgt tacattgctt caaagaaaag 721 gcgcactgca tacaaagaaa agagttactc agctgaacga gatcgacatc atcgaccgaa 781 acaacacaaa gaactcgact tcttgaattt tattacccct ttccgttctt gaactttctt 841 ttcctttgtt tcgaaaactt tcaccacagc ggtagatcct gttgtctttt acttgaaacg 901 aattacgtaa ggatactgac atacgcactt tcattcaact ccgttcttca ttacaccttt 961 ttccaaaagc gcaaaaaaaa catcaaagca caacactact atctctcatt cgcaggtccc 1021 aacggatgcc cgcgtcgacg aggccggcaa acgtacaccc gcttccagac gctcgagctg 1081 gagaaagagt tccacttcaa ccactacctg acccggcgac ggaggatcga aattgcgcac 1141 gccctgtgtc tgaccgagcg gcagatcaaa atctggttcc aaaatcgccg gatgaagctg 1201 aagaaggaac tgcgggcggt gaaggaaatt aacgaacagg tgagttggag gttttaccgg 1261 ttgcagcaag gttttggatt acggagtaat tgttggtctg attacacagc gtaacaaaaa 1321 tgacattttt gcgtgtctca agaatcaaat tatgtgtctc tagtagattt ggggttgctg 1381 aatctgatgc cattctcaga aatgttccag cagtacattt ttagctacag gtcgccaaag 1441 ttgtataaaa cactggtttt attaacgttt acatgaaatt taaggtacaa ttcatcatac 1501 ttttttggta atctaatcca ccaaacatgc aaaatagaac ttgaactttc atttcagaca 1561 taatttgatt gaaattgcgc gattaaattt cgataaaacc gattttttca acatgcttgc 1621 agtctccata caaaattctt cgtttcttct atatggcaaa atacaacaat tctctaaacc 1681 ataaaaaaat aacttttccg tatcgaaagt aatacaaact ttgatgataa gtattgttat 1741 acacataaag tttgaattc // LOCUS AAABGLOB 2138 bp DNA INV 09-FEB-1995 DEFINITION Anadara trapezia beta globin gene, complete cds. ACCESSION L16978 NID g303944 KEYWORDS . SOURCE Anadara trapezia. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 2138) AUTHORS Nassif,N.T., Glenn,W.K. and Mackinlay,A.G. TITLE The organization of the beta-globin gene of the bivalve mollusc Anadara trapezia and its evolutionary relationship to other invertebrate and vertebrate globin genes JOURNAL J. Mol. Evol. 39 (1), 47-55 (1994) MEDLINE 94343542 FEATURES Location/Qualifiers source 1..2138 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" CDS join(1..125,886..1105,1796..1909) /codon_start=1 /product="beta globin" /db_xref="PID:g303945" /translation="MSTVAELANAVVSNADQKDLLRLSWGVLSVDMEGTGLMLMANLF KTSSAARTKFARLGDVSAGKDNSKLRGHSITLMYALQNFIDALDNVDRLKCVVEKFAV NHINRQISADEFGEIVGPLRQTLKARMGSYFDEDTVSAWASLVAVVQAAL" exon <1..125 /note="bases 1 to 29 are PCR-primer sequence and have not been determined independently" /number=1 intron 126..885 exon 886..1105 /number=2 intron 1106..1795 exon 1796..1909 /number=3 3'UTR 1910..>2045 polyA_signal 2040..2045 BASE COUNT 674 a 320 c 377 g 767 t ORIGIN 1 atgagtactg tggccgagtt ggcgaatgct gttgtcagca atgccgatca aaaagatttg 61 ctgagactta gctggggagt attatccgtt gatatggaag gtacaggatt gatgcttatg 121 gcgaagtaag aacacttaag aatatatgtt ttagcaattt ttatttcaat tcatgaaatg 181 acattcttat catgttattt caagggttaa tgcaaaattg cgtgtcaaat gaaatacaat 241 gagcagaaat gtcatttcta atatatacaa ttcttttgtt taataaatat tttgtaccct 301 tatttgtttt aatcccttcc atacctgctt gtgtgagaaa atgtatctca tatggccaca 361 tgacactgtg agggacatta taagtgatac atatcaaagt tctgtccaca tgaattgcaa 421 aacaattgct tctgcatcgt ttatcgaata gagatacagt catattgtaa acatagcaaa 481 tagttgacgg aaataaatac atgccaccct tcataataac ctatgtagtt taacgttatt 541 ttatttattg cgaacatgta atggggatct gtttcgtttt atcttgttaa gttaaaaaat 601 aaaagacaaa tcttaacatc aaaattgtct ctgctacctg gacagaaagg atatttgttt 661 caaacaaatt tagccaatgt tcccgtgttt catcagaatt atccagttac aagtttttac 721 ttatgtttag gaagttagtt agtatgtttt gatttctttc aaaaattatt attattctat 781 gagtgattgt acctggtaaa tctaagtgaa acggtaacta tattcaatat ttgtttttaa 841 agatgtttct tcaattataa acggctcctt ttgatatatt ttcagtttgt ttaaaacaag 901 ttcagcagcc aggacaaaat tcgctcgtct tggagacgta tcagctggta aagataacag 961 caagctgaga ggtcattcta tcaccttgat gtacgccctc cagaacttca tcgatgctct 1021 cgacaatgta gacagattaa agtgtgttgt agaaaaattt gctgtaaacc acatcaacag 1081 acaaatatct gctgacgaat ttggggtaag ctctttcaaa gctctttaaa atattttagt 1141 tttcattata aattggtcgt tgataaagaa tgacatctta tggacgtgta tttatcgtta 1201 catcttaacc tccaagtagt ttgctgaaag gtttgatgat gttttgtacg gcggtttaat 1261 atatgtctgt ttttgcaaag aatttggacg gatgagaaac atatattaca gtatacatcg 1321 ttaatttcat aaatgtagtg atttagaata tcaattgtaa gattatgtct tcactttcct 1381 cgtgagagcg cacgaagtta atctgatttg taattttcaa gtttttacta tgctttggga 1441 ttgtgatttg gaatgtttgt tttttgaata cgtatcatga gttttattac tactttagct 1501 aggttctaag atttactccg tttgaagaag atcgggatag aaaattgact tggtcgggaa 1561 cacgacttga atatagataa tcacgcagta ttttctgttt taaaaaggcc aaatattcta 1621 gtgaagaaac ttaaaaatcg ttttcctctg ttaggattag gaacctttta tgcatattgt 1681 cttctgttaa catttctgtc cattcaactg taaatgcaag taaattattt tacagtgggg 1741 agaacaatcc ctatcaacca cccaatcaat caatcaatat ttatttacat tacaggaaat 1801 agttggcccc ttaaggcaaa cattaaaggc taggatggga agttatttcg atgaagatac 1861 tgtttctgca tgggcttcac ttgttgctgt tgtccaggct gcattataaa tttgtacacc 1921 acaagtaaca gcaataataa gatgacatta acccagtttt cagtgtgtta ccatggccac 1981 agaaagatga aattcaacaa ttcttatttt gtttgtgctt tgtattctcg cagagttcaa 2041 ataaactttt agcatttatt gatattttgt ttaagtttat ttctctattt agaaattatc 2101 ataaaatggt tatttcaaca ttgtaagcaa aatttaaa // LOCUS AAACT 327 bp RNA INV 13-MAR-1997 DEFINITION A.assectella mRNA for actin (partial). ACCESSION X91505 NID g1882996 KEYWORDS actin. SOURCE Acrolepiopsis assectella. ORGANISM Acrolepiopsis assectella Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Lepidoptera; Yponomeutoidea; Plutellidae; Acrolepiopsis. REFERENCE 1 (bases 1 to 327) AUTHORS Hamelin,E., Bigot,Y.Y.B., Rouleux,F., Renault,S. and Periquet,G. TITLE Fast cloning and sequencing of histone H4 and actin messenger RNA fragments and their uses as control JOURNAL Unpublished REFERENCE 2 (bases 1 to 327) AUTHORS Bigot,Y.B. TITLE Direct Submission JOURNAL Submitted (12-SEP-1995) Y.B. Bigot, IBEAS, Faculte des Sciences, Parc de Gremont, 37200 Tours, FRANCE FEATURES Location/Qualifiers source 1..327 /organism="Acrolepiopsis assectella" /dev_stage="imago" CDS <1..>327 /codon_start=3 /product="actin" /db_xref="PID:e209522" /db_xref="PID:g1882997" /translation="ITIGNERFRCPEALFHPSFLGMEACGIHETTYNSIMKYDVDIRK DLYANTVLSGGTTMYPGLASRLQKETTALANSTMKIKISAPPERKYSVWIGGSILASL STFQQM" BASE COUNT 80 a 104 c 77 g 66 t ORIGIN 1 tgatcaccat cggaaacgag agattccgtt gcccagaggc tctgttccat ccctcattct 61 tgggaatgga agcttgcggt atccacgaga ccacttacaa ctcgatcatg aagtacgacg 121 tcgatatccg taaggacctg tacgccaaca ccgtcctgtc cggaggcacc accatgtacc 181 caggactcgc cagccgactg cagaaggaga ctaccgctct ggctaattcc accatgaaga 241 tcaagatcag cgctccccca gagaggaagt actccgtctg gatcggaggc tcaatcctcg 301 cgtccctgtc caccttccag cagatgt // LOCUS AAAGLOBIN 3775 bp DNA INV 15-APR-1994 DEFINITION Anadara trapezia globin gene, complete cds. ACCESSION L20699 NID g472794 KEYWORDS globin. SOURCE Anadara trapezia blood DNA. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 3775) AUTHORS Titchen,D.A., Glenn,W.K., Nassif,N.T., Thompson,A.R. and Thompson,E.O.P. TITLE A minor globin gene of the bivalve mollusc Anadara trapezia JOURNAL Biochim. Biophys. Acta 1089, 61-67 (1991) MEDLINE 91223099 REFERENCE 2 (bases 1 to 3775) AUTHORS Glenn,W.K., Titchen,D.A., Thompson,E.O.P. and Mackinlay,A.G. TITLE Characterization of a repeated sequence occurring within an intron of a globin gene in the bivalve mollusc Anadara trapezia JOURNAL Unpublished (1993) FEATURES Location/Qualifiers source 1..3775 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" GC_signal 115..122 /note="This consensus sequence is displaced from its usual distance from the start point of transcription (cap site) by approximately 150bp." CAAT_signal 265..>273 TATA_signal 354..369 prim_transcript 383..3758 /note="putative" 5'UTR 383..446 exon <447..571 /number=1 /codon_start=1 CDS join(447..571,1786..2005,3441..3554) /codon_start=1 /db_xref="PID:g472795" /translation="MSTFGELANEVVNNSYHKDLLRLSWGVLSDDMEGTGLMLMANLF NMSPESRLKFGRLGHLSTGRDNSKLRGHSITLMYALKNFVDALDDVDRLKCVVEKFAV NHINRQISAEEFGKIVGPFRAVLRIRMGDYFDEEIVAAWAALIAVVQAAL" intron 572..1785 /number=1 exon 1786..2005 /number=2 /codon_start=1 intron 2005..3439 /number=2 repeat_region 2160..2263 /note="consists of 3 copies of a 35bp sequence" /citation=[2] /rpt_type=direct repeat_region 2762..3384 /note="dimeric repeat of approximately 311bp repeat units" /rpt_family="Alu-like" exon 3440..>3553 /number=3 /codon_start=1 3'UTR 3554..>3731 polyA_signal 3730..3735 polyA_site 3758 /note="putative" BASE COUNT 1178 a 601 c 649 g 1347 t ORIGIN 1 ctattaattt tgtcctattt ccaagaaaat aaattaagtt taaatactcc ttttatatgc 61 cttattatta tttgcttata tgtagatcgt ccaggcgtga atgttctagt aattcggggc 121 ccaaatggtt acctggaatc aaatttacta tgacaaatgt tttttttatt ctatatacag 181 atgttagctt gaaacacaac aaagacaaga aatacttttg cgttggatgt ctgaataatg 241 aatatatctg aacgattttt ttttcaatca attctttata aatgttatta gcactatgtc 301 atgttcaaaa tagcttttat gcaaagtaga tgtaaaatgc ctgtacatgc atgatttaaa 361 aaaaaattac gttgaaaata agacttcata tgtagatata cctttataaa gatgatgttg 421 aatgtagtgc ccttaaatat ttcagaatga gtacatttgg tgagttagct aacgaagtcg 481 taaacaactc ttaccacaaa gacctactga ggctaagctg gggagtatta tctgacgaca 541 tggaaggtac tggattgatg cttatggcga agtaagtgtg ataataaaaa aacaaactaa 601 ctaatacatg tccgaattct cgtatttctt tatcactgca ttttgttcta tctcgtcgcc 661 tataattcaa ataaagttta aatcatataa tcagtctcat tatttttata gtcacatatc 721 gccatggaaa cgaggcctgg tgtttcagga gggtaagcaa ctccttttag gtaacgaatt 781 ttgcaatgac attgtatttt aatgacataa ataagatgtt caatgacgtt gataatacta 841 tgagttatta ttgacgtgca aaacaaacgt ataaagtgtg ttaattcaaa tatgcataaa 901 atgttgcatt ggttatttta ttctaaacat tgaattacgg ttttatctcg gaatgccaaa 961 ctttacagag tttgggtttt tatttgtatt tgtgtttact gcatttgata aaagatgttt 1021 ttctgtactt catttttaaa agattatttt atttcattct ttaattatcg catctagtat 1081 aataaatgtt atccaaaata ctcattttta tgtttgaagt ttatttaatc ggatcagttt 1141 tttctctttg tctgccattg ctgccattca ggctgacatc tattttagat atgcatgtat 1201 ttgcagtctt tttaatatga gcctagaatc caattaaaat ttggtcgtca ggaacatttt 1261 ttcttttttg tgtgtcattg ctgatattca aacttacaac tttttaatta tattaccgtc 1321 agtttgatac aagcccagtc gagtaatagt gtttaacgtc acagtcaaga gtatttcact 1381 tatatcgaga cgtcgccagc tatagccaaa gatgaggaaa ttttgcctgt gcgttgagct 1441 gatagcatta tacaacaggg ttctttagcg tgccaaaccc acaatgacac agaacctcgt 1501 ttattttaag tgcccatccg taagaacctt cactttaatt tcgtaatgcc gagtgcttgg 1561 cgaaagaaca gccactaccc actattaaat cttgggtcag acggcggcaa gggatcgaac 1621 acacgacctc ccacttacgg agcgaggcat tctaccaact gagcttcagc agtggttgat 1681 ataagactag tatccagatt aaaatttggt cgtattgaac atttttctct tggtccatca 1741 taactgttat tcaaactaac atcgcaattc tttatatatt cgtagtctgt ttaatatgag 1801 tccagagtcc aggttgaagt tcggtcgtct gggacattta tcaactggaa gagataatag 1861 taaattaagg ggacattcca ttaccttgat gtacgccctc aagaacttcg ttgatgctct 1921 ggatgacgta gacagactaa agtgtgttgt agaaaaattt gccgtcaacc atatcaacag 1981 acaaatctct gctgaagaat ttggggtaag tgatattgca actacattaa aatataataa 2041 aaactacttt aattatatcc tcttttattt caatttcaca cgtgtcaagc gtagttagct 2101 aggcttaatt gcctactctt cttaagcacc gacgtctttt gccgttttgt agattgtgaa 2161 ttgaatattg acctgtatgg tagtgtttaa tttcattgaa tattgacctg tatggtagtg 2221 tttaatttca ttgaatattg acctgtatgg tagtgtttaa tttcattgaa tatcaaaata 2281 acaaacgatg gctggtttag ggcatgaaca gaagtgattt agctcgttta atgacgtagt 2341 ttatcgttaa aatgagacac ttttcgttat tattagaaac tatcttctta taacgaccta 2401 gtattacgaa attaattctt gttgtaacga gatagtttct tgttataatg aaaaagggtc 2461 tagtttttac ggcgtatgat ttcgttataa cgatataaat aaaaacattc aagtccttta 2521 ccagccacca aacaaaccat atttattggg ttttttttta ctttctgatg aatgacttcc 2581 ataaaaactc tgtttatatt aattactcta ccgagttcta agcacaaata gtttatacat 2641 gtatattcga aggaagtaca aacttatatt ccattttatt agctcaactg gctatagcca 2701 gcttagctta tggcatagtg aagcgtgcgt tcgtgcatct gtctgtgcgt tatctttgat 2761 cttcttctca gaaaccactg agccaattga aatcaaattt ggcgtgaaaa gtccttaggt 2821 ggagtagatc aaagttcgtg tatggcaacc ttgtatgaaa tccaaaatga ctgccgtaac 2881 tataaatagc aatatcacta aaatggacat tatgcattaa attcgtcacc cattctcttc 2941 atttttaaaa cagagaaagt atatagctag ctatttttga tatgtaacgg gtttttccga 3001 caattttttc attgactaat ttttgctcat ttatgcacat gaggtctgat ttttgaccaa 3061 atctttaaaa atttcttctc agaaaccaca atgccaactg caatcaaatt tggtgtggaa 3121 ggtccctagg tggagaaaat caaacaagct tgtgcaaggt tatcatgtat gaaatcaaag 3181 atgaccgctg ttactataaa tagcaaaatc actaaaatgg cccttgtgta tttatttttt 3241 caccgatttt ctccatattt gaaacttata aagtaaaaat cctagccatt taatatatgc 3301 gagttttccg agaaattttt ctttgacctt attttagcaa atgagttcaa attatgccag 3361 ttgagcatta caggcctttt gtttatattt tagctggatt cagtgagcgt atagtaaatt 3421 caagaatctt tatattttag aaaatagttg gaccatttag agcggtacta aggattagaa 3481 tgggagacta tttcgatgaa gaaattgttg ccgcatgggc tgcactcatt gctgttgttc 3541 aagctgcatt atgacttgct agattatata agtaaaaatt gaagtatgac tgaactagca 3601 ctcagtgttt tatgcattaa acattttggt ataataaatg atatcctgat gtttaatatt 3661 gatagtagtt cattatgtaa tgatctgtta aaacttcttg attaacttgt ctatattctt 3721 gcaaaatcaa aataaaacca gtttgtaatt agctatgcag tgttgtttgt ttcaa // LOCUS AAAHBAA 551 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 3.10S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25091 L25092 NID g410093 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 551) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..551 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..551 /gene="HBA" intron 32..440 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron size is variable due to these repeats." /number=2 repeat_region 77..145 /note="hypervariable microsatellite polymorphic [d(C)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 417..429 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 441..551 /gene="HBA" /number=3 BASE COUNT 164 a 105 c 85 g 197 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gtaactcatt tactgtctac 61 gccattaaaa catagtcccc ccccctctct ctctctctct ctctctctct ctctctctct 121 ctgtcgctct gtctttctct ctctcgttta aagtatgacc gtgaaattaa tatttagaat 181 agtttaatga catgctctga tgttcttaaa gtgcaaatat tttcaaaata aaaatctaat 241 atttacacat tttgttaaaa ttgaatccaa tagaaagcca agattaacta aaacaactct 301 tagcattctg cacaattata attaattttc gtttgatttt aaattcatta taaacctttg 361 ttgctgtaaa atacctatat atcagttaca ataaaataag aattaattag atttggtttt 421 ttttttttta aatattttag tcaatcattg aaccaatgaa ggagaccctg aaggccagga 481 tgggcagtta ttacagtgat gatgtcgctg gagcatgggc cgctctgatt ggtgtagttc 541 aggctgcttt g // LOCUS AAAHBAB 568 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 4.15S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25093 NID g410094 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 568) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..568 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..468 /gene="HBA" intron 32..457 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron length is variable due to these repeats." /number=2 repeat_region 77..157 /note="hypervariable microsatellite polymorphic [d(C)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 435..446 /note="hypervariable microsatellite polymorphic d(T)n repeat" /rpt_type=tandem exon 458..468 /gene="HBA" /number=3 BASE COUNT 166 a 116 c 84 g 202 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gtaactcatt tactgtctac 61 gccattaaaa catagtcccc ccccctctct ctctctctct ctctctctct ctctctctct 121 ctctctctct ctgtcgctct gtctttctct ctctctcatt taaagtatga cccgtgaaat 181 taatatttag aatagtttaa tgacatgctc tgatgttctt aaagtgcaaa tattttcaaa 241 ataaaaatct aatatttaca cattttgtta aaattgaatc caatagaaag ccaaaattaa 301 ctaaaacaac tcttagccat tcctgcgcac aattataatt aatttcgttt gattttaaat 361 tcattataaa cctttgttgc ctgtaaaata cctatatatc agttacaata aaataagaat 421 taattagatt ttggtttttt ttttttaaat attttagtca atcattgaac caatgaagga 481 gaccctgaag gccaggatgg gcagttatta cagtgatgat gtcgctggag catgggccgc 541 tctgattggt gtagttcagg ctgctttg // LOCUS AAAHBAC 553 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 6.22S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25094 NID g410095 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 553) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..553 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..553 /gene="HBA" intron 32..442 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron size varies due to these repeats." /number=2 repeat_region 78..138 /note="hypervariable microsatellite polymorphic [d(C)n] and [d(T)n] repeat" /rpt_type=tandem repeat_region 411..432 /note="hypervariable microsatellite polymorphic d(T)n repeat" /rpt_type=tandem exon 443..553 /gene="HBA" /number=3 BASE COUNT 165 a 101 c 84 g 203 t ORIGIN 1 caacaggaaa atcagcggtg acgcattcgg ggtaagctaa gtaactcatt tactgttcta 61 cgccattaaa acatagaccc cccccccctc tctctctctc tctctctctc tctctctttc 121 tctctctctc tctctgtcat tgatagtatg atctgcgata ttgatatttg gaatatttta 181 atgacttgat ctgatgttat agcaataaag tgcaaatatt ttcgaaataa taaacaaata 241 tttacacatt ttgttaaaat tgaatccaaa aaaagccaaa ttaactaaaa ctactcttag 301 cattcctcga gcacaattat taataatttt gctttgattt taaattcatt ataaagcttt 361 gttgctgtaa aatacttata tatcagttac aataaaattg gaattaattg tttttttttt 421 tttttttttt ttaatatttt agtcaatcat tgaaccaatg aaggaaacac tgaaggccag 481 gatgggcagt tattacagtg atgatgtcgc tggagcatgg gccgctctga ttggtgtagt 541 tcaggctgct ttg // LOCUS AAAHBAD 551 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 3.11S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite repeat regions. ACCESSION L25095 NID g410096 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 551) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..551 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..31 /gene="HBA" intron 32..440 /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats. Intron size is variable due to these repeats." /number=2 repeat_region 76..143 /note="hypervariable microsatellite polymorphic [(CT)n] and [(CTGT)n] repeat" /rpt_type=tandem repeat_region 419..429 /note="This region constitutes the second of the two hypervariable microsatellite repeat sequences. It conatins a polymorphic d(T)n tract." /rpt_type=tandem exon 441..551 /number=3 BASE COUNT 159 a 92 c 97 g 203 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gttactcatt tattgtctac 61 gccatttaaa catagcccct ctctttgtcg ctctctgtct gtctgtctgt ctgtctgtct 121 gtctgtctgt ctctctctct ctcattgata gtatgatctg caatattgat atttggaata 181 ttttaatgac tgatctgatg ttatagcaat aaagtgcaaa tatttcgaaa taataaacat 241 atatttacac attttgttaa aattgaatcc aatagaaagc caaattaact aaaactgctc 301 ttagcattct gcacaattta taattaattt tcgtttgatt ttaaattcat tataaacctt 361 tgttgctgta aaatacctat atatcagtta caataaaata agaattaatt agatttggtt 421 ttttttttta aatgttttag tcaatcattg aaccaatgaa ggagaccctg aaggccagga 481 tgggcagtta ttacagtggt gatgtcgctg gagcatgggc cgctctgatt ggtgtagttc 541 aggctgcttt g // LOCUS AAAHBAE 380 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 4.17S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25096 NID g410097 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 380) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..380 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..380 /gene="HBA" intron 32..269 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron size is variable due to these repeats." /number=2 repeat_region 78..99 /note="truncated hypervariable microsatellite polymorphic repeat" /rpt_type=tandem repeat_region 248..257 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 270..380 /gene="HBA" /number=3 BASE COUNT 119 a 71 c 66 g 124 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gtaactcatt tactgtctac 61 gcccattaaa acatagtccc cctctctctc tctctctcca atagaaagcc aaaattaact 121 aaaacaactc ttagcattct gcacaattat aattaatttt cgtttgattt taaattcatt 181 ataaaccttt gttgctgtaa aataccaata tatcagttac aataaaataa gaattaatta 241 gatttggttt tttttttaaa atattttagt caatcattga accaatgaag gagaccctga 301 aggccaggat gggcagttat tacagtgatg atgtcgctgg agcatgggcc gctctgattg 361 gtgtagttca ggctgctttg // LOCUS AAAHBAF 615 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 3.22L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25097 NID g410098 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 615) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..615 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..615 /gene="HBA" intron 32..504 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 76..201 /note="hypervariable microsatellite polymorphic [(CT)n] and [(CA)n] repeat" /rpt_type=tandem repeat_region 471..494 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 505..615 /gene="HBA" /number=3 BASE COUNT 185 a 126 c 86 g 218 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gttactcatt tattgtctac 61 gccatttaaa catagcccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacaca cacacctttt ctctctctct ctctctctct ctctctctct 181 ctctctctct ctctctctct cattgatagt atgatctggc gatattgata tttggaatat 241 tttaatgact tgatctgaag ttatagcaat aaagtgcaaa tattttcgaa ataataaaca 301 aatatttaca cattttgtta aaattgaatc caaaaaaaaa gccaaattaa ctaaaactac 361 tcttagcatt ctgcacaatt ataaataatt ttcgtttgat cttaattcat tataaagctt 421 tgttgctgta aaatacttat atatcagtta caataaattg gaattaattg tttttttttt 481 tttttttttt ttttaatatt ttagtcaatc attgaaccaa tgaaggaaac actgaaggcc 541 aggatgggca gttattacag tgatgatgtc gctggagcat gggccgctct gattggtgta 601 gttcaggctg ctttg // LOCUS AAAHBAG 604 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 3.15L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25098 NID g410099 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 604) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..604 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..604 /gene="HBA" intron 32..493 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron length varies due to these repeats." /number=2 repeat_region 77..197 /note="hypervariable microsatellite polymorphic [(CA)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 462..483 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 494..604 /gene="HBA" /number=3 BASE COUNT 193 a 124 c 86 g 201 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacaca cacacacaca cacacacact ctctctctct ctctctctct 181 ctctctctct ctctctcatt gatagtatga tctgcgatat tgatatttgg aatattttaa 241 tgactgactt gattgtatag caagaaagtg caaatatttt cgaaataata aacaaatatt 301 tacacatttt gttaaaattg aatccaaaaa aaaagccaaa ttaactaaaa cttactctta 361 cgatctcgta cattataata atttcgttga tttaaattca ttataaagct ttgttgctgt 421 aaatacttat atatcagtta caataaaatt ggaattaatt gttttttttt tttttttttt 481 tttaatattt tagtcaatca ttgaaccaat gaaggaaaca ctgaaggcca ggatgggcag 541 ttattacagt gatgatgtcg ctggagcatg ggccgctctg attggtgtag ttcaggctgc 601 tttg // LOCUS AAAHBAH 553 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 4.18S) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25099 NID g410100 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 553) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..553 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..553 /gene="HBA" intron 32..442 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di-, and tetranucleotide repeats. Intron length varies due to these repeats." /number=2 repeat_region 76..139 /note="hypervariable microsatellite polymorphic [(CT)n] and [(CTGT)n repeat" /rpt_type=tandem repeat_region 420..431 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 443..553 /gene="HBA" /number=3 BASE COUNT 158 a 97 c 93 g 205 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gttactcatt tattgtctac 61 gccatttaaa catagcccct ctctttgtcg ctctctgtct gtctgtctgt ctgtctctct 121 ctctctctct ctctctctca ttgatagtat gatctgcaat attgatattt ggaatatttt 181 aatgacttga tctgatgtta tagcaataaa gtgcaaatat tttcgaaata ataaacatat 241 atttacacat ttgttaaaat tgaatccaat agaaagccaa attaactaaa actgctctta 301 gccattcctg gcacaattta taattaattt tcgtttgatt ttaaattcat tataaacctt 361 tgttgctgta aaatacctat atatcagtta caattaaatt ggaattaatt cgattttggt 421 tttttttttt taaatatttt agtcaatcat tgaaccaatg aaggagaccc tgaaggccag 481 gatgggcagt tattacagtg atgatgtcgc aggagcatgg gccgctctga ttggtgtagt 541 tcaggctgct ttg // LOCUS AAAHBAI 598 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 5.14L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25100 NID g410101 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 598) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..598 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..598 /gene="HBA" intron 32..487 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 77..188 /note="hypervariable microsatellite polymorphic [(CA)n] and [)CT)n] repeat" /rpt_type=tandem repeat_region 458..478 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 488..598 /gene="HBA" /number=3 BASE COUNT 185 a 117 c 85 g 211 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacact tttctctctc tctctctctc tctctctctc tctctctctc 181 tctctctcat tgatagtatg atctgcgata ttgatatttg gaatatttta atgacttgat 241 ctgatgttat agcaataaag tgcaaatatt ttcgaaataa taaacaaata tttacacatt 301 ttgttaaaat tgaatccaaa aaaaagccaa attaactaaa actactctta gcattctgca 361 caattataaa taatttttgt ttgattttaa attcattata aagctttgtt gctgtaaaat 421 acttatatat cagttacaat aaaattggaa ttaattgttt tttttttttt ttttttttaa 481 tatttagtca atcattgaac caatgaagga aacactgaag gccaggatgg gcagttatta 541 cagtgatgat gtcgctggag catgggccgc tctgattggt gtagttcagg ctgctttg // LOCUS AAAHBAJ 609 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 6.10L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25101 NID g410102 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 609) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..609 /organism="Anadara trapezia" /cell_type="Erythrocyte" /tissue_type="Blood" exon <1..31 /gene="HBA" /number=2 gene 1..609 /gene="HBA" intron 32..498 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 77..190 /note="hypervariable microsatellite polymorphic [(CA)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 458..488 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 499..609 /gene="HBA" /number=3 BASE COUNT 181 a 118 c 89 g 221 t ORIGIN 1 caacaggaaa atcagcggtg acgcattcgg ggtaagctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctctgtcg ctctctgtct ctctctcaca cacacacaca 121 cacacacaca cacacacaca cacactctct ctctctctct ctctcttctc tctctctctc 181 tctctctttc attgatagta tgatctgcga tattgatatt tggaatattt taatgacttg 241 atctgatgtt atagcaataa agtgcaatat tttcgaaata ataaacaaat atttagagat 301 tttgttaaaa ttgaatccaa aaaaagccaa attaactaaa actactctta cgatttccga 361 caattattaa taatttcgtt tgattttaat tcattataaa gctttgttgc tgtaaaatac 421 ttatatatca gttacaataa aattggaaaa taattggttt tttttttttt tttttttttt 481 ttttttttaa tattttagtc aatcattgaa ccaatgaagg agacactgaa ggccaggatg 541 ggcagttatt acagtgatga tgtcgctgga gcatgggccg ctctgattgg tgtagttcag 601 gctgctttg // LOCUS AAAHBAK 595 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 6.12L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25102 NID g410103 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 595) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..595 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..595 /gene="HBA" intron 32..484 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 77..188 /note="hypervariable microsatellite polymorphic [(CT)n] and [(CA)n] repeat" /rpt_type=tandem repeat_region 459..482 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 485..595 /gene="HBA" /number=3 BASE COUNT 178 a 118 c 89 g 210 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacaca cttttctctc tctctctctc tctctctctc tctctctctc 181 tctctctcat tgatgagtat gatctgcgat attgatattt ggaatatttt aatgacttga 241 tctgatgtta tagcaataaa gtgcaaatat tttcgaaata ataaacaaat atttacacat 301 tttgttaaaa ttgaatccaa aaaaagccaa attaactaaa actactctta gcattctgca 361 caattattaa tgattttcgt ttgattttta attcattata aagctttgtt gctgtaaaat 421 acttatatat cagttacaat aaaattggaa ttaattggtt tttttttttt tttttttttt 481 ttagtcaatc attgaaccaa tgaaggagac actgaaggcc aggatgggca gttattacag 541 tgatgatgtc gctggagcat gggccgctct gattggtgta gttcaggctg ctttg // LOCUS AAAHBAL 603 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 6.9L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25103 NID g410104 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 603) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..603 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..603 /gene="HBA" intron 32..492 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 77..188 /note="hypervariable microsatellite polymorphic [(CA)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 459..482 /note="hypervariable microsatellite polymorphic [d(T)n] repeat" /rpt_type=tandem exon 493..603 /gene="HBA" /number=3 BASE COUNT 183 a 121 c 89 g 210 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaggctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacaca cttttctctc tctctctctc tctctctctc tctctctctc 181 tctctctctc attgatagta tgatctgcga tattgatatt tggaatattt taatgacttg 241 atctgatgtt atagcaataa agtgcaaata ttttcgaaat aataaacaaa tatttacaca 301 ttttgttaaa attgaatcca aaaaaaagcc aaattaacta aaactactct tagcattctg 361 cacaattata aataattttc gtttgatttt taattactta taaagctttg ttgctgtaaa 421 atactatata tcagttacaa taaaattgga attaattcga tttgtttttt tgtttttttt 481 ttaatatttt agtcaatcat tgaaccaatg aaggagaccc tgaaggccag gatgggcagt 541 tattacagtg atgatgtcgc tggagcatgg gccgctctga ttggtgtagt tcaggctgct 601 ttg // LOCUS AAAHBAM 593 bp DNA INV 27-JAN-1997 DEFINITION Anadara trapezia (alpha 4.20L) hemoglobin alpha-chain (HBA) gene, exons 2 and 3, intron 2, including hypervariable microsatellite polymorphic repeat regions. ACCESSION L25104 NID g410105 KEYWORDS hemoglobin alpha-chain; microsatellite repeat. SOURCE ark clam. ORGANISM Anadara trapezia Eukaryotae; mitochondrial eukaryotes; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Arcoida; Arcidae; Anadara. REFERENCE 1 (bases 1 to 593) AUTHORS Nassif,N.T. and Mackinlay,A.G. TITLE Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the alpha-globin gene of the bivalve mollusc Anadara trapezia JOURNAL Gene 183 (1-2), 225-230 (1996) MEDLINE 97149303 FEATURES Location/Qualifiers source 1..593 /organism="Anadara trapezia" /cell_type="erythrocyte" /tissue_type="blood" exon <1..31 /gene="HBA" /number=2 gene 1..593 /gene="HBA" intron 32..482 /gene="HBA" /note="This intron contains two hypervariable microsatellite repeat regions which consist of variable numbers of mono-, di- and tetranucleotide repeats." /number=2 repeat_region 77..170 /note="hypervariable microsatellite polymorphic [(CA)n] and [(CT)n] repeat" /rpt_type=tandem repeat_region 449..472 /note="hypervariable microsatellite polymorphic d(T)n repeat" /rpt_type=tandem exon 483..593 /gene="HBA" /number=3 BASE COUNT 190 a 109 c 87 g 207 t ORIGIN 1 caacaggaaa atcagcggtg accgattcgg ggtaagctta gaaactcatt tactgtctac 61 gccattaaaa catagtccct ctctttgtcg ctctctgtca cacacacaca cacacacaca 121 cacacacaca cacacacaca cttttctctc tctctctctc tctctctctc attgatagta 181 tgatctgcga tattgatatt gatatttgga atattttaat gacttgatct gatgttatag 241 caataaagtg caaatatttt cgaaataata aacaaatatt tacacatttt gttaaaattg 301 aatccaaaaa aaaagccaaa ttaactaaaa ctactcttag cattctgcac aattataaat 361 aattttgcgt ttgaatttta aattcattat aaagctttgt tgctgtaaaa tacttatata 421 tcagttacaa taaaattgga attaattgtt tttttttttt tttttttttt ttaatatttt 481 agtcaatcat tgaaccaatg aaggaaacac tgaaggccag gatgggcagt tattacagtg 541 atgatgtcgc tggagcatgg gccgctctga ttggtgtagt tcaggctgct ttg // LOCUS AAALTOX 1562 bp DNA INV 30-SEP-1996 DEFINITION A.australis gene for alpha toxin AaH I'. ACCESSION X76135 NID g852071 KEYWORDS alpha-toxin; neurotoxin; sodium channel. SOURCE Sahara scorpion. ORGANISM Androctonus australis Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthidae; Androctonus. REFERENCE 1 (bases 1 to 1562) AUTHORS Bougis,P.E. TITLE Direct Submission JOURNAL Submitted (15-NOV-1993) P.E. Bougis, CNRS URA 1455, Lab. de Biochimie, Faculte de Medecine N., Bd. Pierre Dramard, F-13916 Marseille cedex 20, FRANCE REMARK revised by author 30-MAY-95 REFERENCE 2 (bases 1 to 1562) AUTHORS Delabre,M.L., Pasero,P., Marilley,M. and Bougis,P.E. TITLE Promoter structure and intron-exon organization of a scorpion alpha-toxin gene JOURNAL Biochemistry 34 (20), 6729-6736 (1995) MEDLINE 95275870 FEATURES Location/Qualifiers source 1..1562 /organism="Androctonus australis" /clone_lib="lambda FIX" /clone="AR802" CAAT_signal 513..517 TATA_signal 624..627 mRNA join(653..748,1174..1445) exon 653..748 /number=1 CDS join(703..748,1174..1379) /codon_start=1 /product="alpha toxin AaH I' precursor" /db_xref="PID:g852072" /db_xref="SWISS-PROT:P01479" /translation="MNYLVMISLALLLMIGVESKRDGYIVYPNNCVYHCIPPCDGLCK KNGGSSGSCSFLVPSGLACWCKDLPDNVPIKDTSRKCTR" sig_peptide join(703..748,1174..1175,748,1174..1184) intron 749..1173 /number=1 exon 1174..1445 /number=2 mat_peptide 1185..1376 /product="AaH I' toxin" BASE COUNT 519 a 219 c 242 g 582 t ORIGIN 1 cgtaattacg atggtgaagt attacttatc tcaagcgaaa gttacgtata ctctattcat 61 ttattaaatg gtatttattt taacaatgaa aaaaattatg tattaggaaa tgtgcattct 121 attgtcaaac gtcttgtatt ctactcattc taacattact aatatatgtt tattccaaga 181 tgatatgata atattaaata tttaaattta ccccccaaaa atatatattc aaaattattt 241 gtttgttgca atttaaaatc aaattttctt tttatttcag actttattta aatgttagat 301 gatttgttaa caaccatccg cataacaaat actgaagaaa tcaatcagtc gaacatattt 361 ctcataccga tttaatttta ataaatttac attagcatca aatttcttta ttcatattgc 421 agttatcaat tatttcagtc gatgacatga tatccatatt tcagtaagag tcggtagtaa 481 aatgacttct gccatctgca tcctgtatcc agattggtcg attgtttatt attacctgat 541 cggcggttga taacattcgc ctattggtag gttatacgaa ttaataaaat aattgcttat 601 gtgggcgttt actttctgtt ctatataaag aacgatttcg ttgtcagaaa ccaacaattc 661 attttgcctg tttttccaga aaattccgta aaacgcttca aaatgaatta tttggtaatg 721 attagtttgg cacttctcct catgataggt aagatttata tactcttaga ataagtattt 781 tgaatgttgt ttatgagcta gtgaattgta gaaatattcc attactgtaa actgttaagg 841 aatggtaatt tcgatgtttg tcgactaaag acatctaaag aaatttttat aaatctaatt 901 ttataaagaa gcatagccat attgatgtac taaaaatttt ttcttaagtc attcgggaat 961 taagagagtc gagattattt tttaaaatat tttaaaacaa tctaaatcga aagagatggc 1021 aatttcatat tagcaattaa tctttgcaga taaatcgaat gtatgttttg agggagataa 1081 aattgcttcc gataccgtaa tggaaatatt aattttttaa tgttttctgt atttgagaat 1141 ttttatttag tgagttattt tttctgacta caggtgtgga gagtaaacgt gatggttata 1201 ttgtctatcc caataactgt gtataccatt gtattccacc atgcgacggt ttatgtaaga 1261 aaaacggtgg ttcaagtggc tcttgctctt ttttagttcc atccggactt gcctgctggt 1321 gcaaagactt gcccgataac gtaccgatta aagatacatc acggaaatgt acccgctgat 1381 aaacctgtag agtaaaatca gaaagaatgt agcctaaaaa taactggtaa ataaacataa 1441 gtaataaaat tgcattgtca ttgattttat ttagtttagt ttcatatgtt agaaacgaag 1501 tcgtcataat tttcactctc ctctttcggt tagagtcaaa ctgaatcttt tatcgaaaag 1561 aa // LOCUS AAAMY 641 bp DNA INV 08-SEP-1993 DEFINITION Aedes aegypti alpha-amylase (amy) gene, partial cds. ACCESSION U01208 NID g397982 KEYWORDS . SOURCE yellow fever mosquito. ORGANISM Aedes aegypti Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Aedes. REFERENCE 1 (bases 1 to 641) AUTHORS Foster,P.G. and Hickey,D.A. TITLE Molecular evolution of mosquito alpha-amylase genes JOURNAL Unpublished REFERENCE 2 (bases 1 to 641) AUTHORS Hickey,D.A. TITLE Direct Submission JOURNAL Submitted (02-SEP-1993) Hickey D.A., University of Ottawa, Biology, 30 Marie Curie, Ottawa, Ontario, Canada, K1N 6N5 FEATURES Location/Qualifiers source 1..641 /organism="Aedes aegypti" gene 1..641 /gene="amy" CDS 1..641 /partial /gene="amy" /codon_start=3 /product="alpha-amylase" /db_xref="PID:g397983" /translation="SESEFASMVRRCNDVGVRIYVDIVINHMAAVSGQGTGGSTVNGL NFPAVPYGPNDFNPPCEIYDYNNRYQVRNCWLVGLPDLALGNEWPRWRVIDLMNKCIN YGVAGFRVDAVKHMWPGDLEFIYGNLVTLNTDHGFPAGARAFLTQEVIDLGNEAISST EYTHLGTVTEFKHSAEIGRVFYGRDRLAHLSNWGEGWGFLPSHLALVFVDNHE" BASE COUNT 150 a 163 c 177 g 151 t ORIGIN 1 ccagtgagag cgaattcgca agcatggtac ggcgctgtaa tgacgttgga gtgcgaatct 61 acgtggacat cgttatcaac catatggccg ccgtttccgg acaaggtact ggaggatcga 121 ctgttaatgg attgaacttc cctgcagtcc cctacggacc gaacgacttc aatcctcctt 181 gtgaaatcta cgactacaac aaccgctatc aggtgcgtaa ctgctggctg gtcggccttc 241 cagatttggc cctaggaaac gaatggcctc gttggcgagt catcgatttg atgaacaagt 301 gtatcaacta tggcgttgcc ggattccgtg ttgatgctgt aaagcacatg tggcctggag 361 atttggaatt catctacggc aacctggtta ctctgaacac cgaccatgga ttcccggcgg 421 gagcgagggc tttccttacg caggaggtca ttgatttggg caacgaagcg atctccagca 481 cggaatacac tcacctggga acggttaccg agttcaagca ttctgccgaa atcggacgag 541 tgttctacgg tcgcgataga ctagcccacc tgtcgaactg gggcgaagga tggggattcc 601 ttccgtcgca cttggcactg gtgttcgtcg acaaccacga a // LOCUS AAASTACIN 2616 bp DNA INV 04-MAR-1997 DEFINITION A.astacus astacin gene. ACCESSION X95684 NID g1200202 KEYWORDS astacin. SOURCE broad-fingered crayfish. ORGANISM Astacus astacus Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Crustacea; Malacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Astacidae; Astacus. REFERENCE 1 (bases 1 to 2616) AUTHORS Geier,G., Jacob,E., Stocker,W. and Zwilling,R. TITLE Genomic organization of the zinc-endopeptidase astacin JOURNAL Arch. Biochem. Biophys. 337 (2), 300-307 (1997) MEDLINE 97169019 REFERENCE 2 (bases 1 to 2616) AUTHORS Geier,G. TITLE Direct Submission JOURNAL Submitted (15-FEB-1996) G. Geier, Universitat Heidelberg, Zoologisches Institut/Zoologie II, Im neuenheimer Feld 230, 69120 Heidelberg, FRG FEATURES Location/Qualifiers source 1..2616 /organism="Astacus astacus" /dev_stage="adult" /tissue_type="muscle" TATA_signal 217..223 exon 246..347 /number=1 CDS join(336..347,616..937,1832..2011,2118..2270,2329..2417) /codon_start=1 /product="astacin" /db_xref="PID:e223404" /db_xref="PID:g1200203" /db_xref="SWISS-PROT:P07584" /translation="MQCAVLLVLLGVVAASPIIPEAARALYYNDGMFEGDIKLRAGRQ PARVGAAILGDEYLWSGGVIPYTFAGVSGADQSAILSGMQELEEKTCIRFVPRTTESD YVEIFTSGSGCWSYVGRISGAQQVSLQANGCVYHGTIIHELMHAIGFYHEHTRMDRDN YVTINYQNVDPSMTSNFDIDTYSRYVGEDYQYYSIMHYGKYSFSIQWGVLETIVPLQN GIDLTDPYDKAHMLQTDANQINNLYTNECSLRH" intron 348..615 /number=1 exon 616..937 /number=2 intron 938..1831 /number=2 exon 1832..2011 /number=3 intron 2012..2117 /number=3 exon 2118..2270 /number=4 intron 2271..2328 /number=4 exon 2329..2516 /number=5 polyA_signal 2500..2504 BASE COUNT 821 a 522 c 641 g 632 t ORIGIN 1 gatatccgat gacagatgac agactgacct agacagtaga tgaagagggg tttatatgac 61 atttatttaa agcgcacacg cagcaacggc aattaattcg gaataatctg ggtaaacgtg 121 tcaagtaacg tcggcccttt gaatgaatgc gtaagtccgg ggtaaaacgt gtacaggtaa 181 acccggttaa cgtttgtttc gggccaacca gttctctata aatgatgtgg cgcgctgttg 241 ctgtcactca aggcctatac cgagcctaca acagaacacg cgtaccaaga cttcttttcc 301 cggtgtcctc gacacaataa aagcgtacct accacatgca gtgcgcggta agcctgaggg 361 ccatttgcat tgcaatggaa tctggtaaat gcctgaaggc tttgatagct gcggatgaag 421 tcgtcacagt ttccgaatga acctgaagtc cgaactggga tcgaaggact ggattgaccc 481 tttcgataac gatgaccgta agctaccgta ccagttgagg ccacctggag tcgatcggct 541 gggtaaatat taggattccc gtaatttaag caaggtgcat gattctaacg atggtataaa 601 tagtttctat ttcaggtatt gctggtattg ttgggggtgg tggcggcatc gcccatcatc 661 ccagaggcag ctcgggccct ctattacaac gatggaatgt ttgaaggaga catcaagctt 721 cgtgctggac gccaacctgc gagggttgga gcagccatct tgggagacga atatctctgg 781 tcaggtggtg tcatacccta tacctttgca ggtgtaagcg gtgcggatca aagtgcaatc 841 ctgagtggaa tgcaggaact ggaggagaaa acatgcatcc gctttgtgcc caggaccact 901 gagtcggact acgttgaaat tttcaccagt ggttcaggtg agcgtggcac tggatgactg 961 atgcatttga tgattagtag aggtcagtgg ttaaagccat tgaaatgatg atcgatctga 1021 cttgatgaga tccagttgaa aatgggcata cagtagcaca ctgaggtagc actagacgat 1081 gacagatgga catagacgtg acagatgaca cagatgacag atgacagata gacagatgga 1141 cagatggaca aaagcatgac agatgacaga tgacagatga gaacacagat gacacacatg 1201 atgacccaca gtgagatacc agtgacagtg gacacagttt aacggagaca aaagtgacac 1261 ccgatggatt taccccaaat tgatgacaga tgacagatat ttagataatc cataaataga 1321 cagtttagac agatgggaca gataaatgac agatgacaga tgacagatga cagatgacag 1381 atgacagatg acagaaaatt gggatagaca gtatatggaa tgatgatgat tacgttgacc 1441 agtgatcagt ggtacagtag atcagaatca gttaggacca gttaggcaga tgacccagtg 1501 acaccaatga tcacgatgac agtagtacga tgacgatgaa aagttttaga tacagatgac 1561 gatgacgatg acgataacag ataaaccgtg atacagattt tgacagatga cagatgaccc 1621 agatgataga aaaacgtaca gatttagata cgatagcaga tgatagacag ataggggaaa 1681 ttcagatgac gattttaagc gtgacagaca ttgcagatga cgatgactag gaattcaatg 1741 cgacagacaa ttagcagata tgacagtagt cgatagacag atacgactaa gacaaaatcg 1801 ttaatacgac ttcagattta ttctatttca gggtgttggt cctatgtggg acgaataagt 1861 ggagcgcagc aggtgtcact gcaagccaat ggttgtgttt accatggcac aatcatccat 1921 gagctcatgc atgccattgg cttctaccat gagcacaccc gtatggaccg agacaactac 1981 gtcactatta actatcaaaa tgttgatcct tgtaagtatt tttacctagg gagacttcct 2041 gccagtactt aaatatattg accaggtctt aaaggctatt cactgaccta gctaaagcct 2101 ggcctgtgat catgcagcaa tgacgtccaa cttcgacatt gacacctact cgcgctatgt 2161 gggtgaggat taccagtact acagcataat gcactacggc aagtactcct tctccataca 2221 gtggggagtc ctcgagacca ttgtacctct gcaaaacggt attgatctca gtctgatcgt 2281 taacgtagtc acgagtgaca cgtacggcta atagcagctt agtacgagct gacccttatg 2341 ataaagctca catgctgcaa actgatgcaa accagatcaa caacctatac acaaatgagt 2401 gtagcctaag gcattagaaa tttcaaagct gacctctact tgtatcatga aacgaggcca 2461 tatttgatgt aagcatttat ttgaagaatc taagaattta ataaatattt actattccgg 2521 acgaccttga ccagatgacc cagtgaattt agcattacac ggtaaattca ggagatggac 2581 tcaaaattta cgattgcatg actcgcatta ctgcag // LOCUS AADHR 1051 bp DNA INV 01-OCT-1996 DEFINITION A.albopictus gene for dihydrofolate reductase. ACCESSION X60192 M59934 NID g5555 KEYWORDS dihydrofolate reductase. SOURCE forest day mosquito. ORGANISM Aedes albopictus Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Aedes. REFERENCE 1 (bases 1 to 1051) AUTHORS Shotkoski,F.A. TITLE Direct Submission JOURNAL Submitted (21-JUN-1991) F.A. Shotkoski, Univ of Minnesota, Dept of Entomology, 1980 Folwell Ave, St PAul MN 55108, USA REFERENCE 2 (bases 1 to 1051) AUTHORS Shotkoski,F.A. and Fallon,A.M. TITLE An amplified insect dihydrofolate reductase gene contains a single intron JOURNAL Eur. J. Biochem. 201 (1), 157-160 (1991) MEDLINE 92007869 FEATURES Location/Qualifiers source 1..1051 /organism="Aedes albopictus" /dev_stage="larvae" /cell_line="ATC-15" promoter 191..195 /note="CATTT box" TATA_signal 236..240 exon 317..396 /number=1 CDS join(317..396,453..933) /EC_number="1.5.1.3" /codon_start=1 /product="dihydrofolate reductase" /db_xref="PID:g5556" /db_xref="SWISS-PROT:P28019" /translation="MKKFSLIVAVCANGGIGIKGDLPWRLRQELKYFSRMTKKIQDSG KRNAIIMGRKTYFGVPESKRPLPERLNIILTRDPSANAYPSEVMVCTSMQEALKKLDE APLVNEIENVWIVGGNAVYKEAMQSDRCHRIYLTEIKETFECDAFFPEITSDFQLVKN DDDVPEDIQEENGIQYQYRIYEKVPK" mRNA join(317..396,453..933) intron 397..452 /number=1 exon 453..933 /number=2 BASE COUNT 301 a 190 c 243 g 317 t ORIGIN 1 agcttatgca tttaaacatc agtacctgct ggactacatg acggcttgct agtttgtgtg 61 tcatacggac gtgttatttt tatgtaaaaa cataacaggt cgtgttcgca ctcagacata 121 catgctgaat tgttgttttt gtttgtggcg cttttttgat tacccacagg attcggcttg 181 atgattcgca catttctatt atcgttatcg cttgcgattg gctgtttgtg ttcgctataa 241 ggtattcgta tgttaagtta aaccggttaa tcgctcgttg ttgcttaagg ttacttacag 301 ttttgttttt caaataatga agaaattcag tctgatcgtt gcagtttgtg ccaatggtgg 361 aattggcatc aaaggcgatc ttccatggag attgaggtaa gtttgtggcc aacactaaca 421 tccacattct catgtgatca cttttcttgc agacaggagc taaaatattt ttcgcgaatg 481 acgaagaaaa ttcaagactc tggcaaacgt aatgccatca ttatgggacg aaagacttac 541 ttcggagtac ctgagtcgaa gcgacccttg ccggaaagac tgaacattat tctgactcga 601 gatcccagtg ccaatgctta tccatcggag gtgatggtgt gcaccagcat gcaggaagca 661 ctgaagaagc ttgacgaagc tccgttggtg aacgaaattg agaacgtatg gatcgttggt 721 ggcaatgcag tctataagga agcgatgcaa tcagatagat gtcaccgcat ttacctgact 781 gaaattaagg agacgttcga gtgtgatgca ttcttcccgg aaattaccag tgattttcaa 841 ctggtgaaga atgatgatga cgttccggag gacattcaag aggagaacgg gattcagtac 901 cagtaccgca tttatgaaaa agtgcctaaa taataattga gcttacttac ttgttgaatt 961 aattccgtta atataatagt ggtatatgtg cccggggcaa acaaccacga taataaacga 1021 taatgataga acaatcattt gaaattgagc t // LOCUS AAH4 312 bp RNA INV 13-MAR-1997 DEFINITION A.assectella mRNA for histone H4. ACCESSION X91508 NID g1882998 KEYWORDS histone H4. SOURCE Acrolepiopsis assectella. ORGANISM Acrolepiopsis assectella Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Lepidoptera; Yponomeutoidea; Plutellidae; Acrolepiopsis. REFERENCE 1 (bases 1 to 312) AUTHORS Hamelin,E., Bigot,Y.Y.B., Rouleux,F., Renault,S. and Periquet,G. TITLE Fast cloning and sequencing of histone H4 and actin messenger RNA fragments and their uses as control JOURNAL Unpublished REFERENCE 2 (bases 1 to 312) AUTHORS Bigot,Y.B. TITLE Direct Submission JOURNAL Submitted (12-SEP-1995) Y.B. Bigot, IBEAS, Faculte des Sciences, Parc de Gremont, 37200 Tours, FRANCE FEATURES Location/Qualifiers source 1..312 /organism="Acrolepiopsis assectella" /dev_stage="imago" CDS 1..312 /codon_start=1 /product="histone H4" /db_xref="PID:e209524" /db_xref="PID:g1882999" /translation="MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG G" BASE COUNT 82 a 63 c 95 g 72 t ORIGIN 1 atgactggtc gtggtaaagg aggaaaagga ttgggaaagg gaggagccaa gcggcacagg 61 aaggttctgc gtgacaacat ccaaggaatt acgaagcccg ctatccgtcg tctggctcgt 121 cggggtggtg ttaaacgtat ttcggggctt atatacgaag agactcgtgg agtcttgaag 181 gtatttctcg agaacgttat ccgcgatgct gttacctata ccgaacatgc taagagaaag 241 accgtgacgg caatggatgt cgtttacgct ctgaaacgtc aaggccgcac cctctatgga 301 tttggcggtt aa // LOCUS AAHAV33A 1048 bp mRNA INV 23-FEB-1993 DEFINITION Acanthocheilonema viteae pepsin-inhibitor-like-protein (Av33) mRNA sequence. ACCESSION M94896 NID g155619 KEYWORDS pepsin-inhibitor-like-protein. SOURCE Acanthocheilonema viteae (library: lambda gt11 library, cloned into pBluescript) male and female adult, also present in microfilariae pseudocoelom cavity cDNA to mRNA. ORGANISM Acanthocheilonema viteae Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Onchocercidae; Acanthocheilonema. REFERENCE 1 (bases 1 to 1048) AUTHORS Willenbuecher,J. and Lucius,R. TITLE The filarial antigens Av33/Ov33-3 show striking similarities to the major pepsin inhibitor from Ascaris suum JOURNAL Mol. Biochem. Parasitol. 57, 349-352 (1993) MEDLINE 93165087 FEATURES Location/Qualifiers source 1..1048 /organism="Acanthocheilonema viteae" /dev_stage="adult, also present in microfilariae" /sex="male and female" /tissue_type="pseudocoelom cavity" /tissue_lib="lambda gt11 library, cloned into pBluescript" BASE COUNT 355 a 195 c 184 g 314 t ORIGIN 1 ggtttaatta cccaagtttg agaattcatt ggattgcata atctggcaac aaatttggcc 61 tcacaaacag ctatgaaaat tctttcttgt ttattattat gcacgataac agtgctggaa 121 ggaaacgtaa tgaacaggca caacaaacgt ttcgctggat ttaacgttgc tggaattggt 181 ggaactgctg gatgtgtagt cgtagataat aaactgtttg ctaatggctt cttccttcga 241 gaactgaccg ctgaagaaca aagagaattt gcacaatacg tcgaagaatc aaataaatat 301 aaggaggaac tgaaggtatc gttggaagag agacgtaagg gatggcagat agcacggcaa 361 agcgagaagg gtgccaaaat tttatcgact attacagaaa agaatttgcc caaaccaccc 421 aaaaaaccat ctttctgcac cgctgctgat accactcagt actacttcga tggttgcatg 481 gttcagaata ataaaatatt tgtgggacaa agttatgtac gagatttaac agcagacgaa 541 gcgaaagagt tgaaatcgtt cgatgtgaaa atgacagcct atcagaaata tctgtcttcc 601 tctattcaac agcaaatgaa tagtctattc ggtgacaaga caaatctctt gaatttattc 661 acgaatacac atctcgaatc aacttcacaa gcatcagaag ctacaactat cccgacgaca 721 actcaaacac cagttgaagc gccagaaaca ccaagtttct gtgtcccgat ctactgatac 781 agtctaaacc agaaaacaat gtttaatgtt tacgtttgtg tgcgcatata atattttttt 841 gccaaaattg agtaatcctc ttttttacct tcaactttat tatcagtttg tttcatagaa 901 ggattacttt taaatgtaat tcacaccaac agctattttt cgactattgg taattactta 961 gtttcaactc actattatat ttttcgcact ctattcgcct cctttaaagt tttttttata 1021 ataaatatta tacattttaa aaaaaaaa // LOCUS AAHCHIT 1566 bp mRNA INV 18-APR-1995 DEFINITION Acanthocheilonema viteae chitinase mRNA, 3' end of cds. ACCESSION L41653 NID g777384 KEYWORDS chitinase. SOURCE Acanthocheilonema viteae (clone library: lambda ZAPII L3 library of R.Adam) infective third-stage larva cDNA to mRNA. ORGANISM Acanthocheilonema viteae Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Onchocercidae; Acanthocheilonema. REFERENCE 1 (bases 1 to 1566) AUTHORS Fuhrman,J.A., Lane,W.S., Smith,R.F., Piessens,W.F. and Perler,F.B. TITLE Transmission-blocking antibodies recognize microfilarial chitinase in brugian lymphatic filariasis JOURNAL Proc. Natl. Acad. Sci. U.S.A. 89 (5), 1548-1552 (1992) MEDLINE 92179220 REFERENCE 2 (bases 1 to 1566) AUTHORS Raghavan,N., Freedman,D.O., Fitzgerald,P.C., Unnasch,T.R., Ottesen,E.A. and Nutman,T.B. TITLE Cloning and characterization of a potentially protective chitinase-like recombinant antigen from Wuchereria bancrofti JOURNAL Infect. Immun. 62 (5), 1901-1908 (1994) MEDLINE 94222561 REFERENCE 3 (bases 1 to 1566) AUTHORS Wu,Y. and Bianco,A.E. TITLE Identification and cloning of a larval-specific chitinase gene from Acanthocheilonema viteae JOURNAL Unpublished (1995) FEATURES Location/Qualifiers source 1..1566 /organism="Acanthocheilonema viteae" /clone_lib="lambda ZAPII L3 library of R.Adam" /dev_stage="infective third-stage larva" CDS <1..1515 /codon_start=1 /product="chitinase" /db_xref="PID:g777385" /translation="GYVRGCYYTNWAQYRQGEGKFLPEDIPIGLCTHILYAFAKVDEK GTSMAFEWNDEDTEWSKGMYSRVIKLRENDPTLKILLSYGGYNFGSSTFAAIAKSAEK RKHFIQSATTFLRKHKFDGFDLDWEYPTGVAEEHAKLVEEMKAAFVEEAKESGKQQLL LTAAVSAGKMTIDESYNVQSLGKSLDLLFLMSYDLHGSWEKNVDLHGELRPTERETSG TGVCNTEFAANYWAEKGMPKQKIIIGIPAYSRGWTLSNPSETAIGAEGDRPSSPSTTN PAGGTAAYWEICKYVKEGGKETVDKKSVGAYMVKGDQWHGYDNEETIKIKMKWLKEED YGGAFMWTLDFDDFKGTSCGKGPYPLLNAINNGLESEQTPSTRAVPETTEDTEVEAMT EAPGTANDTEMETAEMPETTEDIEIETSTETSSTTAAPETTEGTEVETTTSVVKPGEE CPEPDGLFPHHSDCHLFINCANNYPHIMECPVGTFFDDTIKVCNYMRNAPDTCK" BASE COUNT 518 a 286 c 387 g 375 t ORIGIN 1 ggttacgttc gcggatgtta ctacacaaat tgggctcaat atcgacaagg agaaggcaaa 61 ttcttgccgg aagatatccc aataggcctg tgcactcaca ttctttatgc attcgccaaa 121 gttgacgaga aaggcacatc aatggcattt gaatggaatg acgaagatac cgaatggtca 181 aaagggatgt actcacgtgt aataaaactg agagagaacg atccaacact gaaaatcctt 241 ctttcttatg gtggctataa cttcggatcg tcaacttttg ctgcaatagc aaagtcggcg 301 gaaaaacgga agcatttcat tcagtcagct acaacatttc ttcgcaagca taaatttgat 361 ggattcgatc tcgactggga atatccaacc ggtgtagcag aggaacatgc caaacttgtt 421 gaggaaatga aagcggcgtt cgtggaagaa gccaaggaat ccggcaagca acaattactt 481 cttaccgctg ctgtatcagc cgggaaaatg actattgatg aaagttacaa tgttcaatcc 541 cttggaaaaa gtttggatct gctatttctg atgtcgtatg atttacacgg tagttgggag 601 aagaacgtcg acttacacgg agagttgcgt ccgacggaga gagaaacatc cggaactggc 661 gtctgtaata ccgaatttgc agcaaattat tgggcagaga aaggtatgcc gaaacagaaa 721 attatcattg ggattccggc ttacagtcgg ggatggacat taagtaatcc ttcggaaacg 781 gcaattggag cggagggtga tcgtccatca tcgccatcga caacaaatcc cgctggcggt 841 actgcggctt attgggagat atgcaaatat gtgaaagaag gtggcaagga aacggtggat 901 aaaaaaagtg ttggagcgta tatggtaaaa ggagatcagt ggcacggtta cgataatgag 961 gaaactatta aaattaaaat gaaatggctg aaagaggagg attatggcgg tgcctttatg 1021 tggactcttg attttgatga tttcaaaggt acaagttgtg gcaaaggtcc atatccactg 1081 ttaaatgcta tcaataatgg gcttgaaagt gagcaaacac catcaacaag agcagtaccg 1141 gaaactacag aagacactga agttgaagca atgacggaag caccgggaac tgcaaatgat 1201 actgaaatgg aaacagcaga aatgccagaa actacggaag atattgaaat tgaaacatcg 1261 accgagacat catcaacaac agcagcaccg gaaaccacag aaggcactga agttgaaaca 1321 acgacgagcg ttgttaaacc cggtgaggaa tgtccggagc ccgatggttt atttccgcat 1381 cacagtgatt gccatttgtt cattaattgc gcaaataact atccacacat aatggaatgt 1441 ccggtgggca ccttttttga tgacacaatc aaagtttgca attatatgag gaacgcgccg 1501 gatacatgca aatgatttgg caattttatg tgatatatat atttgttgga ataaaaatct 1561 agggta // LOCUS AAHCHITA 1640 bp mRNA INV 29-MAY-1996 DEFINITION Acanthocheilonema viteae chitinase mRNA, complete cds. ACCESSION L42010 NID g804648 KEYWORDS chitinase. SOURCE Acanthocheilonema viteae. ORGANISM Acanthocheilonema viteae Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Onchocercidae; Acanthocheilonema. REFERENCE 1 (bases 1 to 1640) AUTHORS Fuhrman,J.A., Lane,W.S., Smith,R.F., Piessens,W.F. and Perler,F.B. TITLE Transmission-blocking antibodies recognize microfilarial chitinase in brugian lymphatic filariasis JOURNAL Proc. Natl. Acad. Sci. U.S.A. 89 (5), 1548-1552 (1992) MEDLINE 92179220 REFERENCE 2 (bases 1 to 1640) AUTHORS Wu,Y., Adam,R., Williams,S.A. and Bianco,A.E. TITLE Chitinase genes expressed by infective larvae of the filarial nematodes, Acanthocheilonema viteae and Onchocerca volvulus JOURNAL Mol. Biochem. Parasitol. 75 (2), 207-219 (1996) MEDLINE 96258561 FEATURES Location/Qualifiers source 1..1640 /organism="Acanthocheilonema viteae" /dev_stage="infective stage larva" 5'UTR <1..15 mRNA <1..>1640 CDS 16..1590 /codon_start=1 /product="chitinase" /db_xref="PID:g804649" /translation="MNWIMITLFIILANAITVVNGYVRGCYYTNWAQYRQGEGKFLPE DIPIGLCTHILYAFAKVDEKGTSMAFEWNDEDTEWSKGMYSRVIKLRENDPTLKILLS YGGYNFGSSTFAAIAKSAEKRKHFIQSATTFLRKHKFDGFDLDWEYPTGVAEEHAKLV EEMKAAFVEEAKESGKQQLLLTAAVSAGKMTIDESYNVQSLGKSLDLLFLMSYDLHGS WEKNVDLHGELRPTERETSGTGVCNTEFAANYWAEKGMPKQKIIIGIPAYSRGWTLSN PSETAIGAEGDRPSSPSTTNPAGGTAAYWEICKYVKEGGKETVDKKSVGAYMVKGDQW HGYDNEETIKIKMKWLKEEDYGGAFMWTLDFDDFKGTSCGKGPYPLLNAINNGLESEQ TPSTRAVPETTEDTEVEAMTEAPGTANDTEMETAEMPETTEDIEIETSTETSSTTAAP ETTEGTEVETTTSVVKPGEECPEPDGLFPHHSDCHLFINCANNYPHIMECPVGTFFDD TIKVCNYMRNAPDTCK" 3'UTR 1591..>1640 BASE COUNT 540 a 300 c 400 g 400 t ORIGIN 1 gtcttacaag gtgacatgaa ctggattatg ataacgcttt tcattatact tgccaacgca 61 attactgttg taaacggtta cgttcgcgga tgttactaca caaattgggc tcaatatcga 121 caaggagaag gcaaattctt gccggaagat atcccaatag gcctgtgcac tcacattctt 181 tatgcattcg ccaaagttga cgagaaaggc acatcaatgg catttgaatg gaatgacgaa 241 gataccgaat ggtcaaaagg gatgtactca cgtgtaataa aactgagaga gaacgatcca 301 acactgaaaa tccttctttc ttatggtggc tataacttcg gatcgtcaac ttttgctgca 361 atagcaaagt cggcggaaaa acggaagcat ttcattcagt cagctacaac atttcttcgc 421 aagcataaat ttgatggatt cgatctcgac tgggaatatc caaccggtgt agcagaggaa 481 catgccaaac ttgttgagga aatgaaagcg gcgttcgtgg aagaagccaa ggaatccggc 541 aagcaacaat tacttcttac cgctgctgta tcagccggga aaatgactat tgatgaaagt 601 tacaatgttc aatcccttgg aaaaagtttg gatctgctat ttctgatgtc gtatgattta 661 cacggtagtt gggagaagaa cgtcgactta cacggagagt tgcgtccgac ggagagagaa 721 acatccggaa ctggcgtctg taataccgaa tttgcagcaa attattgggc agagaaaggt 781 atgccgaaac agaaaattat cattgggatt ccggcttaca gtcggggatg gacattaagt 841 aatccttcgg aaacggcaat tggagcggag ggtgatcgtc catcatcgcc atcgacaaca 901 aatcccgctg gcggtactgc ggcttattgg gagatatgca aatatgtgaa agaaggtggc 961 aaggaaacgg tggataaaaa aagtgttgga gcgtatatgg taaaaggaga tcagtggcac 1021 ggttacgata atgaggaaac tattaaaatt aaaatgaaat ggctgaaaga ggaggattat 1081 ggcggtgcct ttatgtggac tcttgatttt gatgatttca aaggtacaag ttgtggcaaa 1141 ggtccatatc cactgttaaa tgctatcaat aatgggcttg aaagtgagca aacaccatca 1201 acaagagcag taccggaaac tacagaagac actgaagttg aagcaatgac ggaagcaccg 1261 ggaactgcaa atgatactga aatggaaaca gcagaaatgc cagaaactac ggaagatatt 1321 gaaattgaaa catcgaccga gacatcatca acaacagcag caccggaaac cacagaaggc 1381 actgaagttg aaacaacgac gagcgttgtt aaacccggtg aggaatgtcc ggagcccgat 1441 ggtttatttc cgcatcacag tgattgccat ttgttcatta attgcgcaaa taactatcca 1501 cacataatgg aatgtccggt gggcaccttt tttgatgaca caatcaaagt ttgcaattat 1561 atgaggaacg cgccggatac atgcaaatga tttggcaatt ttatgtgata tatatatttg 1621 ttggaataaa aatctagggt // LOCUS AAHNECY 687 bp mRNA INV 20-JUN-1995 DEFINITION Acanthocheilonema viteae (clone Av17) nematode cystatin mRNA, complete cds. ACCESSION L43053 NID g867674 KEYWORDS cystatin. SOURCE Acanthocheilonema viteae female adult cDNA to mRNA. ORGANISM Acanthocheilonema viteae Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Onchocercidae; Acanthocheilonema. REFERENCE 1 (bases 1 to 687) AUTHORS Hartmann,S., Kyewsky,B. and Lucius,R. TITLE Modulation of host immune responses by a protease inhibitor of a filarial parasite JOURNAL Unpublished (1995) FEATURES Location/Qualifiers source 1..687 /organism="Acanthocheilonema viteae" /note="(vector lambda gt11)" /dev_stage="adult" /sex="female" 5'UTR 1..22 mRNA 1..687 CDS 23..496 /codon_start=1 /function="cysteine protease inhibitor" /evidence=experimental /product="cystatin" /db_xref="PID:g867675" /translation="MMLSIKEDGLLVVLLLSFGVTTVLVRCEEPANMESEVQAPNLLG GWQERNPEEKEIQDLLPKVLIKLNQLSNVEYHLMPIKLLKVSSQVVAGLRYKMEIQVA QSECKKSSGEEVNLKTCKRLEGHPDQIITLEAWEKSWENFLQVKILEKKEVLSSV" 3'UTR 497..687 BASE COUNT 234 a 96 c 150 g 207 t ORIGIN 1 aataaacaaa gctaacgacg atatgatgtt gtcaataaag gaggatggat tgttggtggt 61 acttttattg tcgttcggtg tgacgacagt tttggtgcgc tgtgaagaac ccgcaaatat 121 ggaatctgag gtacaagcgc ccaatttatt gggaggatgg caggaacgca atccggaaga 181 gaaagaaata caggacctgt tgccaaaggt attaattaaa ctaaatcagc tgtcaaacgt 241 ggagtaccac ctaatgccaa tcaaattact gaaagtttca tctcaagttg tggctggttt 301 gagatacaag atggaaatac aggttgctca atcagaatgc aaaaaaagtt caggcgagga 361 agttaatctg aaaacatgta aaagattgga aggacatccg gatcagatta tcacgttgga 421 ggcatgggag aaatcatggg aaaatttttt gcaagtcaaa attctggaaa aaaaagaagt 481 actctcatca gtgtgattct ttttgcaagt ctcacttaac gttatccact gtgctttgta 541 gtatttttat tgtttaatgc ttacgatttt ttttaaaatg cattttgtaa ttttatcaaa 601 atcaaaatgg tattgtaatt ggtgcaaaaa atatttaaag ttgataatgc caatattcca 661 gcttataatt gttaaagtac attgtga // LOCUS AAITS2 485 bp DNA INV 18-JUL-1995 DEFINITION A.atroparvus DNA for internal transcribed spacer 2 (ITS2). ACCESSION Z50103 NID g902587 KEYWORDS internal transcribed spacer; ITS2. SOURCE Anopheles atroparvus. ORGANISM Anopheles atroparvus Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anopheles. REFERENCE 1 (bases 1 to 485) AUTHORS Mancini,P., Silvestrini,F., Romi,R., Severini,C. and Marinucci,M. TITLE Sequence analysis of the ribosomal DNA internal transcribed spacer 2 in Paleartic species of the Anopheles maculipennis complex (Diptera: Culicidae) JOURNAL Unpublished REFERENCE 2 (bases 1 to 485) AUTHORS Mancini,P. TITLE Direct Submission JOURNAL Submitted (18-JUL-1995) Mancini P., Istituto Superiore di Sanita', Parassitologia, Viale Regina Elena 299, Rome, Italy, I-00161 FEATURES Location/Qualifiers source 1..485 /organism="Anopheles atroparvus" /strain="atrSI" /isolate="atrSI-A" /clone="atrSI-A1" /dev_stage="adult" /sex="Male" rRNA 1..485 /note="internal transcribed spacer 2 (ITS2)" BASE COUNT 127 a 131 c 118 g 109 t ORIGIN 1 atcactcggc tcgtggatcg atgaagaccg cagctaaatg cgcgtcacaa tgtgaactgc 61 aggacacatg aacaccgata agttgaacgc atattgcgca tcgtgcgaca cagctcgatg 121 tacacatttt tgagtgccca tatttgatca taacccaagc caaacggcgt acctcaccgt 181 acgtggagtt gatgaaaggg tctggatacg ccatcctttc tcttgcatcg aagtcgtagc 241 gtgtagcaac cccaggtttc aacttgcaaa gtggccatgg ggctgacacc tcaccaccat 301 cagcgtgctg tgtagcgtgt tcgacccagt tcggtcatcg tgaggcgtta ctaacggaga 361 agcaccagct gctgcgtgta tctcatggtt cccccaacca tagcagcaga gatacaagac 421 cagctcctag cagcgggagc tcatgggtct caaataatgt gagactaccc cctaaattta 481 agcat //