Phylodendron - Phylogenetic tree printer

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Phylodendron

Phylogenetic tree printer

Tree styles

Tree data (newick / nh format)

Upload tree file: or paste data or URL in box below

# sample2 data
# 5s RNA - Clustal generated alignment
# modified to match Felsenstein's spec for NH format with [comments]
# note: these "#" comment lines are not NH/Newick standard

#title "5s RNA - NH format tree"
(
(
(
(
(
(
(
(
(
(
(
(
acarr58s[test comment1 http://iubio.bio.indiana.edu/.bin/genbankq.html?acarr58s]:0.11274,
teyrrb:0.14060)
[420]:0.01115,
(
crerrb:0.13393,
(
mnin58s:0.06545,
(
(
vfarrb:0.00059,
vfarrs58ss:-0.00059)
[1000]:0.05064,
(
whtrrb:0.00023,
whtrrb1:-0.00023)
[1000]:0.04224)
[947]:0.03368)
[681]:0.01701)
[444]:0.01647)
[323]:0.00949,
(
tlarrb:0.02849,
yscrrb:0.02884)
[996]:0.06069)
[586]:0.02205,
hsarrb:0.09744)
[587]:0.02527,
(
[test comment2]ddirr58s:0.24122,
(
trbrrb:0.04868,
trfrrbcf:0.11799[test comment3 http://iubio.bio.indiana.edu/.bin/genbankq.html?trfrrbcf])
[995]:0.12412)
[249]:0.00877)
[534]:0.02206,
shrrrb:0.20195)
[526]:0.01662,
(
amgrrb:0.14336,
(
(
bmorrb:0.01205,
pcrrrb:0.01204)
[1000]:0.07333,
drorrbst[http://iubio.bio.indiana.edu/.bin/genbankq.html?drorrb]:0.04740)
[578]:0.01936)
[540]:0.01552)
[936]:0.03457,
snlrrb:0.07567)
[976]:0.03625,
fsbrramf:0.03039)
[724]:0.01253,
fsbrrbtr:0.02273)
[470]:0.00526,
(
xebrrbb:0.00110,
xelrrbl:0.00515)
[867]:0.01506)
[814]:0.00573,
(
humrrb:0.00085,
musrrb:-0.00085)
[171]:0.00085,
ratrrb:-0.00085);

Title:
See sample data 1 and data 2

Extra options

Output
Format: width: height: (pixels) For image maps, make hyperlinks to labels Base URL for labels (URL's in node comments will be hyperlinked) Font style size

Tree growth
horizontal vertical regular	use node lengths fixed size

Node position
intermediate centered V shaped	weighted inner

from Phylodendron, for drawing phylogenetic trees, by D.G. Gilbert version 0.8d
Software at http://iubio.bio.indiana.edu/soft/molbio/java/apps/trees/

Send comments to us at archive@iubioarchive.bio.net